Protein

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Genbank accession
ADM26690.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGKFLGISGGAIELKDRVAVRSASQLAGTLSSSKEYFIDGIIDMGTQSVEVPAGGLYLTGYNFDTSKLISSEPNYTMFTSPVGGSGNIVGKDYGIEVTGVNSKVYDISGDTGFEAFEFSRINYNDCESLGEINNYRQGFETGTGRFGGKPELTLSGTWVGGYFIESSIVRSLADGAYSLFKAGTALTLGSRFRTNMNVDLPASASFFDFSPANFPNPSTLQVDSAIVTRLGAQDATDLNYTPNISASDLACSWSNNVGMPNTFEGGSIGIGASAVTNINTIDVFEDVAATSWITADLQHFDNPVGGQLRHLGINPREYKTIASLTIEGANNDVLTLRVVKWDDSASSFVTVLDQVRPVNNLVGARDVAFFNINVNTRLDQNDYIKLQVANNSGTANVTAETDGYLVVEQR
Physico‐chemical
properties
protein length:410 AA
molecular weight: 43868,07930 Da
isoelectric point:4,48189
aromaticity:0,09756
hydropathy:-0,11146

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage H105/1
[NCBI] 		877240 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas sp. H105
[NCBI] 		1348393 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Pseudoalteromonadaceae > Pseudoalteromonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADM26690.1 [NCBI]
Genbank nucleotide accession
HM588722.1 [NCBI]
CDS location
range 14912 -> 16144
strand +
CDS
ATGGGTAAATTTTTAGGTATATCAGGTGGAGCAATTGAACTGAAAGACCGTGTCGCAGTTAGGTCTGCGTCACAACTGGCAGGAACCTTAAGCTCATCAAAAGAGTACTTCATTGACGGCATTATCGATATGGGAACTCAATCAGTAGAAGTTCCTGCTGGCGGGCTTTATTTGACAGGTTACAACTTTGACACTTCAAAGTTAATATCTAGCGAGCCAAATTACACAATGTTCACATCACCAGTTGGCGGCAGCGGAAATATCGTTGGTAAAGACTATGGCATCGAAGTCACAGGGGTAAACTCCAAGGTTTACGATATTAGCGGCGATACAGGATTTGAGGCTTTTGAGTTTAGTCGCATAAATTATAACGACTGTGAATCACTTGGCGAGATTAACAACTACAGGCAGGGATTTGAAACTGGCACAGGTAGATTCGGTGGAAAGCCAGAGTTAACACTATCAGGAACATGGGTTGGCGGGTACTTTATTGAGTCGTCAATAGTAAGAAGCTTAGCCGATGGTGCTTACTCTCTATTTAAAGCTGGTACGGCGCTCACGCTAGGGTCAAGATTTAGAACAAACATGAATGTTGACCTACCTGCAAGCGCTTCATTCTTTGACTTTTCCCCTGCAAACTTCCCCAACCCGTCAACACTGCAAGTTGATAGTGCCATTGTTACTAGACTTGGCGCGCAGGATGCTACGGATTTAAACTACACACCTAACATATCAGCGAGCGACTTAGCATGCTCATGGTCTAATAATGTAGGGATGCCAAACACGTTTGAAGGTGGCTCAATTGGTATAGGCGCATCGGCAGTCACAAATATAAATACCATTGATGTTTTTGAGGATGTTGCAGCAACATCTTGGATAACCGCTGACTTGCAGCACTTCGATAATCCAGTGGGCGGTCAATTGAGGCATTTAGGTATAAACCCAAGGGAGTACAAAACAATAGCTTCATTGACTATTGAAGGCGCCAATAATGATGTGTTAACACTAAGGGTTGTTAAATGGGATGATTCTGCATCATCATTTGTTACCGTGTTAGATCAAGTTAGGCCAGTTAACAATCTTGTCGGCGCCCGAGATGTTGCATTTTTTAACATAAACGTAAATACAAGGCTAGACCAAAATGATTACATCAAGCTGCAAGTAGCAAACAACTCAGGAACCGCAAATGTTACTGCGGAAACTGATGGCTACTTAGTAGTGGAGCAGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2cbf29844426059c8f4542eaddce2a8881a8e67a61af9a2b49e84cf62a6981c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9552
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1 Duhaime,M.B., Wichels,A., Waldmann,J., Teeling,H. and Glockner,F.O. 2011 20613791 GenBank