Protein

View in Explore
Genbank accession
ATE84734.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MSLVTKTANDTFAPYDSGGNPRQIVPHDAQVWGTEVERALLAFQAGGGIIFPSKATMDATLTYAANQMAWVIGDATVANNGVYRKIGASGTGSWVRMADLPYSFIIATDVGAGTANAIQATTSIPVSSSALVWSNVFEANTSSPVTISFNGGTALTIKTNSGADIVAGGLVAGMILLGIVSGSTFRLVSDQASAALLAAVEAAKSAAEAARDEAQAAAAVANGTVPVISRTALKALDTAVKKAAILYGEGGRNGDFAWDGSNLSATLSPLSVTSTGVNSSTETVTANGHGFQTGQAVYPTTTVNGLTAETFYYVIGVDANNFKLAASYADAVAGVAFNLTGTTNFTVKRYIDPLEILYVVPTGKARDGSQGAWRRVYDGAVQVVWAGVDVPVDAATAACAAVAISSTHLSAGRLSFLFKDGITLNSGVTIPNAQIWDGYDAGNGLGISFAATAGTCVTVIGSGAALRGFDMKQIGTPTSSTGVQVGNGEQGYAPVLRDLVVRGFSTNMKLRSNVVTKLENVTSVDAKDYHFVIENIAHPDSGDWTLSGVTYSSSAARFTGYISGTTLTVMSVVGGVLEVGQYVSGPGVADGTKITALGTGTGGTGTYSVSPSQTVASAVAPASFGSGAKAGVYYRNSGGGKIVAMKGLGAQIGLYLSIPDVPGAPGGGVTQDLQIVGSSFENQSVAGMKFERTAGSTTAAFGLITVVGSEFAGHPISIWFGVGITGSFVGGNAHGSGIDVPVQIENGATNIVVGLSAFQSAEYVRDNRTNFDETGYLDRRDTWSINSGSNSVWSTAFQVQIGRHGGGVVDVILEGLVQGAGSFVVYRKLSIRYDGTSLSVVTVATSSDGVAIGFQVTTSGDTASIQYRLGGSGAQLQGTATIVPEGKFKRIARG
Physico‐chemical
properties
protein length:894 AA
molecular weight: 91157,87180 Da
isoelectric point:5,51863
aromaticity:0,08054
hydropathy:0,18188

Domains

Domains [InterPro]
DC_1788
STR
27–536
DC_1788
Coil
Unmapped
197–220
Coil IPR023366
ATE84734.1
1 894
Architecture
STR
STR 27-536 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATE84734.1
1 894
Domain Start End Length (AA) Confidence
N-terminal 1 262 262 0,9935
Central domain 263 772 511 0,8610
C-terminal 773 894 121 0,9884
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-262
Central
263-772
C-terminal
773-894

Taxonomy

  Name Taxonomy ID Lineage
Phage Sinorhizobium phage phi3LM21
[NCBI] 		2029634 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sinorhizobium sp. LM21
[NCBI] 		1449788 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Rhizobiaceae > Sinorhizobium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATE84734.1 [NCBI]
Genbank nucleotide accession
MF614628.1 [NCBI]
CDS location
range 31805 -> 34489
strand +
CDS
ATGTCTCTTGTCACGAAGACGGCAAACGACACCTTTGCGCCCTATGACAGCGGCGGCAACCCGCGTCAGATCGTTCCTCACGATGCGCAGGTCTGGGGCACAGAGGTGGAACGCGCGCTTCTCGCCTTTCAGGCTGGCGGCGGCATTATCTTCCCCAGCAAGGCGACGATGGACGCGACGTTGACCTATGCCGCCAACCAGATGGCGTGGGTGATCGGCGATGCGACTGTCGCGAACAACGGCGTCTATCGGAAAATCGGCGCCTCGGGTACTGGCTCCTGGGTGCGAATGGCGGATCTTCCCTATTCGTTCATCATCGCGACCGACGTCGGCGCAGGCACGGCGAACGCGATCCAGGCAACGACGAGCATTCCGGTCAGTAGCTCGGCGCTTGTATGGTCGAACGTGTTCGAGGCTAACACTTCGTCTCCCGTGACGATTTCGTTCAACGGCGGCACGGCGCTGACGATAAAGACCAACAGCGGGGCCGATATCGTCGCCGGCGGCCTGGTCGCCGGCATGATCCTGCTCGGCATTGTGAGCGGCTCGACGTTCCGCCTTGTCAGTGACCAGGCGAGCGCAGCGCTGCTTGCCGCAGTGGAGGCCGCGAAGTCGGCTGCGGAGGCGGCGCGCGACGAGGCGCAGGCTGCGGCCGCCGTCGCAAACGGTACCGTGCCAGTCATCAGCAGAACCGCGCTGAAAGCGCTCGACACGGCAGTGAAGAAGGCGGCGATCCTCTACGGGGAGGGCGGACGCAACGGCGATTTTGCGTGGGATGGATCAAACCTATCCGCGACCTTGTCGCCGCTGTCCGTCACCAGCACCGGAGTAAACAGCTCGACCGAGACGGTTACAGCGAACGGTCATGGTTTCCAAACCGGGCAGGCAGTCTATCCCACCACAACTGTGAATGGGCTGACAGCTGAAACCTTCTACTATGTGATCGGGGTTGATGCGAACAACTTCAAGCTGGCGGCGTCCTATGCGGATGCCGTGGCGGGCGTAGCGTTCAACCTGACCGGCACGACGAATTTCACCGTCAAGCGGTACATCGACCCGCTCGAAATCCTTTACGTAGTCCCGACCGGCAAGGCTCGCGATGGCTCGCAGGGAGCTTGGCGAAGAGTTTATGACGGAGCCGTACAGGTCGTTTGGGCAGGCGTTGACGTACCCGTCGATGCTGCAACGGCGGCATGTGCTGCGGTCGCGATTTCCTCTACGCACCTTTCGGCAGGTCGATTGTCCTTCCTTTTCAAGGATGGCATCACCTTAAATTCCGGCGTTACGATCCCGAACGCACAGATCTGGGACGGCTACGACGCCGGCAACGGACTGGGAATTTCCTTCGCTGCAACGGCCGGAACCTGCGTCACCGTCATTGGCTCAGGTGCTGCGCTTCGCGGCTTCGACATGAAGCAGATAGGCACCCCGACATCGTCGACGGGTGTGCAGGTCGGGAACGGCGAACAGGGCTATGCGCCGGTTCTCCGGGATCTCGTCGTTCGCGGATTTTCCACGAACATGAAGCTCCGCTCCAACGTCGTCACGAAGCTGGAGAATGTCACGTCGGTTGATGCGAAGGATTACCACTTCGTCATCGAGAACATCGCACATCCAGATTCCGGCGACTGGACCCTATCGGGGGTTACTTACTCTTCATCGGCGGCTCGGTTCACAGGGTACATCAGCGGAACGACACTGACGGTGATGTCTGTCGTGGGTGGGGTTCTGGAGGTCGGTCAGTACGTTAGCGGACCGGGTGTTGCCGATGGCACAAAAATCACGGCCCTCGGCACAGGCACCGGAGGAACCGGCACTTACTCGGTTAGCCCATCACAAACTGTCGCATCAGCTGTCGCTCCCGCGAGTTTCGGGTCTGGCGCAAAGGCCGGCGTTTATTACAGGAATTCCGGTGGGGGCAAGATCGTAGCCATGAAGGGCCTCGGCGCCCAGATCGGCCTGTATCTTTCGATCCCGGACGTTCCCGGCGCTCCTGGCGGCGGGGTCACTCAGGATTTGCAGATCGTCGGCTCTTCCTTCGAGAACCAGTCTGTTGCCGGTATGAAGTTCGAGCGCACTGCTGGTTCCACCACTGCTGCGTTCGGTTTGATCACCGTGGTCGGTTCCGAATTCGCCGGCCATCCGATCAGCATTTGGTTCGGTGTCGGGATTACTGGTTCCTTCGTGGGGGGGAATGCCCACGGTTCGGGCATCGATGTGCCCGTGCAGATCGAAAACGGTGCGACCAACATCGTTGTCGGTCTCAGCGCGTTCCAAAGTGCGGAATACGTTAGGGACAACAGGACCAACTTCGACGAGACTGGTTATCTAGATCGTCGCGACACCTGGTCGATCAATTCCGGAAGCAATTCGGTGTGGAGCACCGCGTTTCAGGTCCAGATTGGTCGCCATGGTGGCGGTGTCGTCGATGTCATCCTGGAGGGACTTGTCCAGGGCGCCGGCTCTTTCGTCGTTTATCGCAAGCTGAGTATTCGTTACGACGGGACTTCGCTCTCGGTTGTTACGGTGGCTACATCCTCCGACGGCGTGGCTATCGGCTTCCAAGTTACGACTTCCGGTGATACAGCGAGTATCCAGTATCGCTTAGGTGGTTCGGGCGCGCAGCTGCAGGGCACTGCGACAATTGTTCCCGAGGGCAAGTTCAAACGGATTGCGAGAGGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b306ff753f2f7bec6dc0e9b4d1e1ea5d03738d2ea62ae1fa56985d278d1a62ee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8187
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50