Protein

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Genbank accession
AUR85391.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADCSSYPTKSTAETFKLDAETVNEVVTSSDDRTPPASDGLTKKTLAGIENDATNQLADIQQRADDQYSDINNQYVLRNKGDYATDPLLESYYEFTDFNGLIYFPIASPHQVDSTTYPDPSNDPNLRLGQATDDSLVTATGSTTPRRLSDRFGEVIHSADFGALCDGATDDSDAVEAALNYRDNVTVDLGGARISREIRMLKSNVTMTGDLQVAISGQIYTFYRTRYQHGTVRIEQNWVAPSIFKMSGRHLRNNSGIGEVEGGRRFYHNFLFNDLIITSKTDWITSQSWEFPGGLFEWTLGTDFSASDLNTVGMFFNSIRNVSTTCFADFFLQVVFEARAYGAGQKNSVFFNDNLIEGCTSNHIKNGIKIIADDPDEVGISDSGGYIKVKDYSLQAFTGTERFIHNDLALDIEITDGANWDWQLPIGEFNQDPIYCSNKSAVVTMDKHQDYNNGLKSCPNLRIMYPQNDPHPSTYWVTRLESQGWVPGEVATTSQMVGAFCQGTILSTNDSLVTTPWRKITLTDLIEFKGGDRVVLYNSGGNVQNFSYLYECPIHVYSESYDMDKQFNPVNMICQTHNIMPFSFIARSYNSSPKYYKVMEVDGVDYFSLSFNVPDSAGNITQSVDRYMTIKVTPGTSVEQKVTVIANGVLDEPIKFPFYWKTTGGITEIFMRFAEIEDTGQNEYKIMSSTRTYKQVEFMIEDAGDSVDPSWTAAIDY
Physico‐chemical
properties
protein length:717 AA
molecular weight: 80312,15320 Da
isoelectric point:4,58079
aromaticity:0,11576
hydropathy:-0,39958

Domains

Domains [InterPro]
DC_0489
STR
1–712
DC_0489
IPR012334
STR
131–419
IPR012334
AUR85391.1
1 717
Architecture
STR
STR 1-712 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR85391.1
1 717
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,9933
Central domain 173 486 315 0,9635
C-terminal 487 717 230 0,8189
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-486
C-terminal
487-717

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.074.O._10N.222.49.B7
[NCBI] 		1881191 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR85391.1 [NCBI]
Genbank nucleotide accession
MG592450.1 [NCBI]
CDS location
range 17516 -> 19669
strand +
CDS
ATGGCTGATTGTAGTTCATATCCAACCAAATCAACGGCGGAAACATTTAAGTTAGATGCTGAAACAGTAAATGAGGTCGTTACTTCTAGCGATGATCGAACACCACCAGCGAGTGACGGATTAACTAAAAAGACGCTCGCTGGGATCGAGAATGACGCAACAAACCAACTTGCAGATATTCAACAGCGAGCAGACGATCAATACTCAGACATTAACAATCAGTATGTTTTGCGCAACAAAGGCGATTACGCAACAGACCCGCTGCTAGAGTCTTACTATGAGTTTACTGATTTTAATGGCCTTATTTATTTCCCTATCGCTTCTCCACATCAGGTTGATAGCACTACATACCCAGACCCATCAAATGACCCCAATTTGAGATTGGGGCAAGCGACAGATGATAGTCTAGTAACAGCAACTGGAAGTACAACGCCGAGACGATTGAGCGACAGGTTTGGAGAGGTGATCCACTCAGCAGATTTTGGCGCATTGTGCGACGGTGCAACTGATGACTCTGATGCCGTAGAAGCTGCCCTTAATTATCGCGATAACGTTACAGTTGATCTTGGTGGGGCTAGGATTTCTAGGGAGATAAGAATGCTAAAGTCTAATGTCACGATGACCGGAGACTTGCAGGTGGCTATTAGCGGTCAAATATATACATTCTATCGAACACGCTATCAGCATGGTACAGTTCGTATTGAGCAGAATTGGGTGGCTCCTTCTATTTTTAAGATGAGTGGTAGACATTTAAGAAACAACAGTGGTATAGGAGAGGTGGAAGGTGGTCGTAGGTTCTATCATAATTTCCTTTTTAATGACTTGATTATAACATCAAAAACTGATTGGATTACATCGCAGTCATGGGAGTTTCCAGGAGGATTGTTTGAATGGACTCTTGGCACTGACTTTTCAGCTAGTGATTTAAACACGGTTGGAATGTTTTTTAATTCAATCAGAAATGTCAGCACGACATGTTTTGCTGATTTCTTCCTTCAAGTTGTTTTCGAAGCAAGGGCGTACGGAGCCGGACAAAAAAACTCAGTGTTTTTTAATGACAATCTTATAGAGGGATGCACATCAAATCACATAAAAAACGGGATCAAAATTATAGCTGACGACCCAGACGAAGTTGGAATATCAGACAGTGGTGGGTACATTAAGGTTAAAGATTATAGCTTGCAAGCGTTCACAGGAACAGAGAGGTTTATTCATAATGACCTAGCTTTGGACATTGAAATTACTGATGGCGCAAATTGGGACTGGCAATTGCCTATCGGTGAATTCAACCAAGATCCAATCTATTGCAGCAACAAATCAGCCGTAGTAACAATGGATAAGCATCAAGACTACAATAACGGGTTAAAGAGCTGCCCAAATCTCAGGATTATGTATCCGCAAAATGATCCACACCCATCAACGTATTGGGTTACTAGGCTTGAGTCGCAAGGGTGGGTGCCTGGAGAGGTAGCAACAACTTCACAGATGGTAGGGGCATTTTGCCAAGGTACTATTTTATCAACAAATGACAGCTTAGTTACGACACCATGGAGGAAGATAACATTAACCGATTTAATAGAGTTTAAGGGTGGTGATCGAGTTGTGCTATATAACAGTGGCGGTAATGTTCAAAATTTCTCTTATCTGTATGAGTGTCCAATTCATGTATACAGTGAAAGTTACGACATGGACAAACAATTCAACCCAGTCAACATGATATGCCAAACTCACAACATAATGCCTTTTTCTTTCATAGCCAGATCTTACAATTCAAGTCCAAAATATTACAAGGTGATGGAGGTAGATGGTGTTGATTACTTCTCATTGTCTTTCAATGTCCCAGATAGTGCTGGGAACATAACGCAGAGCGTTGATAGGTATATGACGATAAAAGTCACACCAGGAACATCTGTAGAGCAGAAGGTTACTGTCATTGCGAATGGAGTTTTAGATGAACCAATCAAGTTTCCTTTTTACTGGAAAACAACAGGTGGCATAACGGAGATATTTATGAGATTTGCAGAAATTGAGGATACCGGCCAAAATGAATACAAAATAATGTCATCAACTAGGACTTACAAACAAGTAGAGTTTATGATTGAGGATGCAGGTGATTCTGTAGATCCTAGTTGGACGGCAGCTATAGATTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
900c185ad4b90b3af06bcd21ab6f91107af29bb4831e63691150f3a28ceb1fd3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5303
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank