Protein

View in Explore
UniProt accession
A0A8S5PEF3 [UniProt]
Protein name
Tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
MLSVKTQDGWLPITVTTNAYVEKDEEGEETLSFDVPPDSELFTYLKTEAEVRTEDNLYLIKGVNKLITQATITCELNMDDWKASYYLKTADIAALQTKTIGDVLNYIKPAGWTVTGEEVRTIKRTPDKEKCNGYDVLMRCKTVYDVQYDFDCLSKVVTVIDPYASADTGLYVTPELNMKDHTYKESSTELVTRLYCYGADDLTFADINNGKPYIDLQGYKGRPIVSSWTDGRYTNKESLLADGQKKLQELAAPVGSYTINMIDLAAVDDKYKDLQVKIRETAHCIIDPVRGIEIPHRIVKTRKYLLDEDKSNNTITLSNEPRKITDMINQMQENVTELTQDGYKKETTIRNNSESIELIAKGLGEAQLKLQEDQIIALISKAINNGNSMQTMQVIIDILGLTIKNGGIKVYDGNNSLVLYVDQNTKKLNFSGTISGTTITGTLFDGGTIRTSDGDIGGWKIDSNGLYNGTVKIKNSGITNIYTWADLYIIRLIIMGTINADDDMVYHYDFNGDGKITPADYATLKNRLKAM
Physico‐chemical
properties
protein length:531 AA
molecular weight: 59466,69010 Da
isoelectric point:4,90546
aromaticity:0,07910
hydropathy:-0,38399

Domains

Domains [InterPro]
DC_1274
ATT
4–513
DC_1274
IPR007119
Unmapped
22–310
IPR007119 IPR002105
IPR010572
ENZ
96–331
IPR010572 IPR018247
A0A8S5PEF3
1 531
Architecture
ATT
RBD
ATT 4-513 | RBD 514-528 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5PEF3
1 531
Domain Start End Length (AA) Confidence
N-terminal 1 439 439 0,9451
Central domain 440 520 82 0,8239
C-terminal 521 531 10 0,9755
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-439
Central
440-520
C-terminal
521-531

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctorp6
[NCBI] 		2825673 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE04753.1 [NCBI]
Genbank nucleotide accession
BK015394 [NCBI]
CDS location
range 7976 -> 9571
strand -
CDS
ATGTTAAGCGTCAAGACACAAGACGGATGGCTGCCTATCACGGTAACCACGAACGCATATGTAGAAAAGGATGAAGAGGGCGAAGAAACGCTCTCTTTTGATGTTCCGCCAGATTCAGAGCTTTTTACGTATTTAAAGACTGAGGCAGAAGTAAGGACAGAGGATAACCTCTATCTTATCAAAGGCGTAAACAAGTTGATCACGCAGGCCACAATCACCTGTGAATTGAATATGGATGATTGGAAGGCATCATATTATCTCAAAACAGCAGATATTGCTGCACTGCAGACAAAGACCATAGGCGATGTGTTGAATTATATCAAGCCTGCAGGATGGACGGTAACCGGCGAAGAAGTCAGAACGATCAAACGTACACCGGACAAAGAAAAATGCAATGGGTATGATGTACTGATGCGCTGCAAGACTGTATATGATGTGCAGTATGATTTTGATTGTTTGAGCAAGGTTGTTACTGTAATAGACCCATACGCTTCTGCAGACACCGGATTGTATGTAACTCCAGAGTTGAACATGAAGGACCATACATATAAGGAGAGCAGCACAGAGCTTGTCACAAGGCTATACTGCTACGGTGCTGATGATTTGACGTTTGCTGATATCAATAATGGCAAACCATATATCGACCTGCAAGGCTACAAAGGCAGGCCGATAGTAAGCTCCTGGACAGACGGCCGTTATACCAATAAGGAAAGCCTACTGGCAGATGGTCAGAAGAAGCTGCAGGAGCTGGCAGCACCTGTTGGATCATACACAATCAATATGATAGACCTTGCTGCGGTGGACGATAAGTACAAAGACCTGCAGGTGAAAATCCGAGAGACAGCGCATTGTATCATTGACCCTGTAAGAGGTATTGAGATACCACACCGTATCGTAAAAACCCGTAAGTATCTGCTGGATGAAGATAAGTCGAACAACACGATCACATTGTCTAATGAGCCGCGCAAAATAACGGATATGATAAACCAGATGCAGGAAAATGTAACTGAGCTTACGCAGGATGGATATAAGAAAGAAACGACTATCCGGAATAACTCAGAAAGCATTGAACTGATTGCAAAAGGTTTAGGCGAAGCTCAGTTGAAATTGCAGGAAGACCAGATCATAGCGCTTATATCAAAGGCGATAAACAACGGTAACTCCATGCAGACCATGCAGGTGATTATAGATATTCTGGGACTAACGATAAAAAATGGTGGAATCAAAGTATACGATGGTAATAACAGCCTTGTACTCTATGTTGATCAGAATACAAAGAAATTAAATTTCTCTGGTACGATATCAGGCACGACGATAACAGGAACATTATTCGATGGTGGGACTATCAGGACAAGCGACGGGGACATAGGAGGCTGGAAAATAGATTCCAATGGATTATATAATGGTACAGTCAAAATTAAGAATAGTGGAATCACCAATATCTATACATGGGCTGACTTATATATTATCCGTTTGATAATTATGGGCACCATAAATGCTGATGATGATATGGTCTACCACTATGATTTTAATGGAGATGGAAAAATAACACCAGCTGATTACGCTACGTTGAAGAATAGATTAAAAGCTATGTAG

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Molecular Function IEA:InterPro (UniProt)
GO:0000272 polysaccharide catabolic process Biological Process IEA:InterPro (UniProt)

Tertiary structure

PDB ID
b8a4b5f6f632a9c347aaea0eca3903fa0f36a126a43fb59384feb6c00ae8bd4a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8089
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50