Protein

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Genbank accession
QKK83142.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MALSVQRATSDGTMTNIVLSIEFFDTRDIFVTLDETPAIEGTDYTWQGRTQINFINAPLADGVEVTLTRRTNRTALRHIFSEGAEFTRANLDDAHTQLLYLSQEMTEGSGISDFYGDLDMHRYRVRNMAQGTENRDAVTFLQLKEVADRVTAIENIKGTNRRGPITISTKSPDTVPVQYEEWVMIGDVDNGAFVNSSNDKDQE
Physico‐chemical
properties
protein length:203 AA
molecular weight: 22822,00220 Da
isoelectric point:4,61416
aromaticity:0,07882
hydropathy:-0,47340

Domains

Domains [InterPro]
DC_1609
STR
1–202
DC_1609
IPR005604
ATT
4–108
IPR005604
QKK83142.1
1 203
Architecture
ATT
STR
ATT 1-108 | STR 109-202 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP_MGD1
[NCBI] 		2736651 No lineage information
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKK83142.1 [NCBI]
Genbank nucleotide accession
MT501516.1 [NCBI]
CDS location
range 35552 -> 36163
strand +
CDS
ATGGCATTAAGTGTACAACGTGCTACGAGCGACGGTACTATGACCAACATCGTCCTCAGCATTGAATTCTTTGACACGCGTGACATTTTCGTTACGCTTGATGAGACACCTGCAATCGAGGGTACAGATTACACTTGGCAGGGTCGCACACAGATTAACTTTATTAACGCCCCGTTAGCTGATGGGGTAGAGGTTACGCTTACACGGCGTACCAACCGCACTGCGCTGCGTCATATCTTCTCTGAGGGTGCTGAGTTCACCAGAGCTAACTTAGACGACGCGCACACGCAATTGCTGTACCTAAGTCAAGAAATGACTGAGGGTTCTGGCATTAGCGATTTCTATGGTGACTTGGATATGCACCGCTACCGAGTGCGTAACATGGCACAAGGTACGGAGAACCGAGACGCTGTAACGTTCCTCCAATTGAAAGAGGTTGCAGACCGTGTAACCGCAATTGAGAACATTAAGGGTACGAACCGCCGAGGCCCAATCACTATCTCCACTAAATCCCCTGACACCGTTCCGGTTCAGTACGAGGAATGGGTGATGATTGGTGATGTGGACAATGGTGCGTTCGTTAACTCATCTAACGATAAAGACCAAGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4c3a8f6334c99cd860ca51b9309033e0764a3f5a9475be5eef0653b7fc6e6431
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8076
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50