Protein

View in Explore
Genbank accession
AZB66805.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNLITDLSNKAGAELRTQLIYNFKEIQKALKVQDSKVIENKINQKVSKYEYDMKREIRAIVLPEMSPLQITDDYAKSLTDLKGEQHESLKGRLDADLKYIAKKSMKTSIDDRFIVTENGTVFADYLSMSNTIKSIKKIGVIGDSVAKGSRATKNFGKYLAEMLGATVQNEGVSGATMSTVKANSIYEQAAKIRNKDLVIIQGTDDDWLYNGSAGVSIGTNKTNVKTFYGAFCKTVELIKTNNPHAKIIVMTATRQLPVNGTTIRRKDTDKNSIGLTLEDYVNAQVLACTELNVPVFDAYHTNLLDPYNPAFRVKNMVDGLHPNEKGHEVITHELIKNYFYFYG
Physico‐chemical
properties
protein length:343 AA
molecular weight: 38373,45110 Da
isoelectric point:8,93920
aromaticity:0,07872
hydropathy:-0,37901

Domains

Domains [InterPro]
DC_0665
ATT
1–101
DC_0665 SSF52266
IPR051532
Unmapped
95–339
IPR051532
IPR036514
STR
133–342
IPR036514
IPR036514
STR
135–342
IPR036514
cd00229
ENZ
138–336
cd00229
IPR013830
ENZ
140–329
IPR013830
AZB66805.1
1 343
Architecture
ATT
STR
ATT 1-101 | STR 132-342 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiSP119-2
[NCBI] 		2491317 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus pseudintermedius
[NCBI] 		283734 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZB66805.1 [NCBI]
Genbank nucleotide accession
MK075005.1 [NCBI]
CDS location
range 34155 -> 35186
strand +
CDS
ATGAATTTAATTACAGATTTAAGTAATAAGGCTGGAGCCGAATTACGCACTCAATTAATTTATAACTTTAAGGAGATACAAAAGGCATTAAAAGTTCAAGATTCAAAAGTGATAGAAAACAAAATCAATCAAAAAGTATCTAAGTATGAATACGATATGAAAAGAGAGATAAGAGCAATTGTTCTTCCTGAAATGTCACCTCTTCAAATTACTGACGATTATGCGAAAAGTTTAACAGATTTAAAAGGAGAGCAGCACGAATCATTAAAAGGTAGATTAGACGCAGATTTAAAATACATTGCGAAAAAATCAATGAAAACATCTATTGATGACCGATTTATCGTTACCGAAAACGGCACAGTATTTGCAGATTATTTGAGCATGTCTAATACTATTAAAAGTATTAAAAAGATTGGTGTGATTGGCGATTCTGTTGCAAAAGGTAGTCGTGCAACTAAAAACTTTGGCAAGTATCTGGCAGAAATGTTAGGCGCTACGGTTCAAAATGAAGGTGTCAGCGGTGCAACAATGTCCACAGTTAAAGCAAATTCCATTTATGAACAAGCGGCCAAAATTAGAAATAAAGATTTAGTTATTATCCAGGGAACTGATGATGACTGGCTTTACAATGGTTCTGCTGGTGTTTCTATCGGTACCAATAAAACAAATGTCAAAACTTTTTATGGTGCATTTTGTAAAACGGTTGAGTTAATAAAAACAAATAATCCACATGCAAAAATTATTGTTATGACAGCAACCAGACAACTACCTGTCAATGGTACAACGATTCGTCGTAAAGATACTGACAAAAATAGTATAGGTCTGACTTTAGAAGATTATGTAAATGCGCAAGTACTTGCATGTACAGAATTAAATGTACCTGTTTTCGATGCATATCATACGAATTTGTTAGATCCTTACAATCCTGCATTTAGAGTGAAAAATATGGTGGATGGTCTACATCCAAATGAAAAAGGCCATGAAGTTATTACACACGAATTAATAAAAAATTATTTCTATTTTTATGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
26c982eefada0246de5c74c1f50f185b1c5374d0f0d68ac4ea8bb9f86e09b746
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7918
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage of Staphylococcus pseudintermedius Wipf,J.R.K., Deutsch,D.R. and Fischetti,V.A. 2014-10 — GenBank