Protein

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Genbank accession
URQ03468.1 [GenBank]
Protein name
tail fiber adhesin
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGLPSTGPISLNDVRIELDRPSGAISLGDADVRDLAERPSGSISMGDLRGKSAFSHTIVRGLLYRFGEPRSSGWGYAKNSPNFENAGSLSPTTIGGRSVTDIAYSEDRISTDSFIALSSDLTQSTLRVTTESGTVFIFRHRSPSKRFYELTSDNESQWKSFLSTAVGSSAKINIEYY
Physico‐chemical
properties
protein length:177 AA
molecular weight: 19243,06370 Da
isoelectric point:6,12306
aromaticity:0,09040
hydropathy:-0,38418

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PVA23
[NCBI] 		2938950 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URQ03468.1 [NCBI]
Genbank nucleotide accession
ON190025.1 [NCBI]
CDS location
range 37421 -> 37954
strand +
CDS
ATGGGATTACCATCAACTGGTCCAATATCACTTAATGATGTTCGAATCGAGTTGGACAGACCTAGCGGGGCTATCTCGCTAGGTGATGCAGATGTGCGCGACCTAGCAGAGAGACCTAGTGGGTCGATATCAATGGGAGACCTTAGAGGTAAATCTGCATTCTCGCATACTATAGTTCGAGGGTTGTTATATCGTTTTGGTGAACCTCGTTCTTCTGGTTGGGGTTATGCGAAAAATAGTCCGAACTTCGAAAACGCAGGTTCGTTGAGTCCTACTACTATTGGTGGTAGAAGTGTAACTGACATAGCATATAGCGAAGACCGAATATCGACTGATTCGTTCATTGCATTGTCTTCTGATCTGACACAATCAACACTACGAGTTACAACTGAAAGTGGTACTGTGTTTATATTCAGACATCGCTCGCCTTCAAAGCGTTTTTACGAGTTGACATCTGATAATGAATCGCAATGGAAGAGTTTCTTATCGACTGCGGTAGGGTCTTCAGCTAAAATTAACATCGAATATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b327e2e3bbd4a6a60195049b9075865c08b27c895333781fd9b0349e96bf99c5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7348
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a bacteriophage and its application for the inhibition of Vibrio alginolyticus in shrimp farming He,Z. 2024 — GenBank