Protein

View in Explore
Genbank accession
YP_009621206.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MGFGPAYGTGRGGGAVDIFTKKDGNPAIFANTGARDTYFTTNPDELAKVKSSGNAVAIGTTDQITAAYVYKNNAWQAIATNFKGDKGAPGAPGDGIDYSHLEDNQLPKWDSKAKMFVSSGILSQEDGEIRMAPNSLTFGHHKMSSAIADVTFTNLGTNENYSFVYQTMNPGDKDAYIREIDSNIEEIVRVPVGTDDVVNPSNTVTVDVDEIFLGGTFILSQDTQDVLMEVYNFDNPTQLIWRDNLGDMPSGENTVTFDTPFKCRAGFKYIIHLLSKAGDLVAKGSGSSFSWKINRAKMYIKKVASQDWVNEQPFIDDVTLTGNMFTFTMANGATKSVTLPPATGGVASPYDFTSFNSDKTPVLSEVANSTPVYHFNGLADSTFTLPSTDILPPNKNIALLIRNASPNNSSLSVVSSGTDFIDRANIRTLNIPQGMLAMFISDYTRDLWHMVPLDSASSGQNLNTNQIVKSIQPTASGNGLVTTYYDDTSITTTFDPWVSDINKLNDAVDTLQRQLKSKTRYYVYKGSNTPPPDIPTGARGGYYFTFTGTSADVVLPAPSRTAAIADGTILFVDNNSTSYKVTVTTSGSDTIAGGTKVDLPAESAAWYVRNGNNWQELYSGYLPESHKKLIDEIKTLISASNTFMRDVGVQGDDPNAGKVECTELEFHKCKVTQDTTVPTKGIVKFEGTTFVNPDGSKITTDVIKLVGMELVDPLDGTPPKLLLHGSGNLPTPHPTSGYGFFSDSASTPDTVNLNSLPVFRNGRVSIHKDTTDPQYAYILLPPGEGTDADRIGELGGLPSYWAKSEKIYNIGGVSRTYTVFRSPYPFKEQDVTLIIYH
Physico‐chemical
properties
protein length:837 AA
molecular weight: 90804,24320 Da
isoelectric point:4,97264
aromaticity:0,09677
hydropathy:-0,32306

Domains

Domains [InterPro]
DC_1058
STR
25–825
DC_1058
Coil
Unmapped
501–521
Coil
YP_009621206.1
1 837
Architecture
STR
STR 25-825 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009621206.1
1 837
Domain Start End Length (AA) Confidence
N-terminal 1 356 356 0,9194
Central domain 357 572 217 0,1896
C-terminal 573 837 264 0,2352
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-356
Central
357-572
C-terminal
573-837

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Ceto
[NCBI] 		2570300 Uroviricota > Caudoviricetes > Demerecviridae > Cetovirus > Cetovirus ceto
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009621206.1 [NCBI]
Genbank nucleotide accession
NC_042094.1 [NCBI]
CDS location
range 84879 -> 87392
strand +
CDS
ATGGGATTTGGCCCAGCCTATGGTACTGGTAGGGGCGGTGGAGCAGTAGACATCTTTACTAAAAAGGATGGGAACCCTGCCATTTTCGCCAATACTGGTGCTAGAGACACATACTTTACAACAAACCCTGATGAATTAGCTAAAGTAAAATCATCAGGTAATGCAGTAGCAATAGGTACTACTGATCAAATAACAGCTGCCTATGTATATAAAAATAATGCATGGCAAGCAATTGCAACCAACTTCAAGGGCGACAAAGGTGCTCCAGGTGCTCCAGGAGATGGGATTGATTACAGTCACCTAGAGGACAATCAATTACCTAAGTGGGATTCAAAAGCAAAAATGTTTGTTAGCTCAGGCATACTTTCCCAAGAAGATGGTGAAATAAGAATGGCACCTAACTCCTTGACCTTTGGGCACCACAAAATGTCCTCTGCTATAGCAGATGTTACCTTCACTAACCTAGGCACAAACGAAAACTACTCGTTTGTTTATCAGACAATGAACCCTGGCGATAAGGATGCTTACATACGTGAAATAGATAGCAATATAGAAGAGATCGTAAGGGTACCTGTGGGGACAGATGATGTTGTGAACCCATCAAATACAGTTACAGTAGATGTTGATGAAATATTCCTAGGCGGTACTTTTATACTATCACAAGATACACAAGATGTGTTAATGGAGGTATATAATTTTGATAATCCTACTCAACTTATTTGGAGAGATAACTTAGGTGATATGCCTTCAGGAGAAAACACAGTTACCTTCGATACACCATTTAAATGTAGAGCTGGTTTTAAGTATATTATCCACCTACTAAGTAAGGCAGGTGACTTAGTAGCAAAAGGTTCCGGTAGCTCTTTCAGTTGGAAGATCAACCGTGCGAAAATGTACATTAAAAAAGTTGCCTCTCAAGATTGGGTAAATGAACAGCCGTTTATTGATGACGTTACTTTAACCGGTAACATGTTTACCTTTACTATGGCGAATGGGGCAACTAAATCTGTTACTTTACCTCCAGCTACAGGTGGTGTCGCATCACCTTACGACTTTACTAGCTTTAATTCTGATAAAACTCCTGTTCTATCAGAGGTTGCGAATAGTACCCCAGTATACCACTTTAATGGTCTAGCAGATTCTACCTTTACGTTACCATCTACGGACATTTTACCGCCTAATAAAAACATCGCCCTACTAATTAGAAATGCAAGCCCCAATAACTCTTCCCTAAGTGTAGTGTCTAGTGGGACTGATTTTATAGATAGAGCAAACATTCGTACACTAAATATACCGCAAGGTATGCTGGCCATGTTTATAAGTGATTATACTAGAGACCTATGGCACATGGTACCTCTTGATTCAGCTAGTAGTGGACAGAATCTAAATACTAATCAAATAGTTAAGAGCATACAACCAACAGCAAGTGGTAATGGTCTAGTTACTACATACTACGACGACACAAGTATAACTACCACATTCGATCCTTGGGTTTCGGATATTAATAAACTTAACGACGCTGTAGATACGCTACAAAGACAACTTAAATCTAAGACTAGATACTATGTGTATAAGGGAAGTAACACCCCACCACCAGATATCCCAACTGGAGCTAGGGGCGGGTACTACTTTACCTTTACAGGTACTTCAGCTGATGTAGTATTACCAGCACCAAGCAGAACAGCGGCAATAGCTGATGGTACAATCCTGTTTGTTGATAACAACAGTACAAGCTATAAAGTGACTGTAACAACCTCAGGGTCTGATACTATTGCAGGTGGTACCAAGGTAGATCTACCAGCTGAATCAGCAGCCTGGTACGTTCGTAACGGAAATAACTGGCAAGAACTGTACTCAGGTTACTTACCAGAATCGCATAAAAAGCTAATAGACGAGATAAAAACTCTAATATCAGCAAGTAATACTTTTATGCGAGATGTTGGTGTACAAGGTGATGATCCTAACGCAGGTAAAGTAGAGTGTACAGAACTAGAGTTTCATAAGTGTAAGGTAACTCAAGATACCACAGTGCCTACTAAAGGTATTGTTAAGTTTGAAGGTACTACGTTTGTAAACCCAGACGGTTCAAAAATAACCACAGATGTTATTAAATTGGTAGGGATGGAATTGGTTGATCCATTAGATGGTACACCACCTAAACTATTACTACATGGTAGTGGTAACTTACCTACGCCACACCCAACTAGTGGTTACGGTTTCTTTAGTGATTCTGCATCTACACCTGATACTGTTAACTTAAATAGTCTTCCAGTATTTAGAAATGGTAGAGTAAGTATACATAAAGATACAACTGATCCACAATACGCATATATCCTACTACCACCAGGTGAAGGTACTGATGCTGACCGAATTGGTGAGCTAGGTGGACTTCCTTCTTACTGGGCTAAGAGTGAGAAAATCTATAATATTGGTGGCGTATCAAGAACATATACAGTGTTCCGTTCCCCTTATCCATTTAAGGAGCAGGATGTAACACTAATAATTTACCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2cbdda762765b27fe0f03e661d987ec551e199c9219eaa5e085a9c9fff21b74b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5720
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50