Protein

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Genbank accession
QPB08160.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVTKTEYLVNGGNTGWSKSDVISALETAFAGLGWHSGTAKTGVPTTCLAPGSDRPVYESVSSNWQYATRILPITFHRYNRYYDITNNGSTSWSVKRREDINYIYGPNYAGNEGWIRMYDIADIATGTAAVYRAGANTIPNRNGTTDPMFVDGQTYYIINIGDDDWVRLADSEADALAGTYIEPVNGSWSGDYGRFEIDLGTNPVLTVRQGDTINFSNNSTGHPLYIQDQSGAYNSSRVLNNTNYRTQSYRDFPSNQGIEIGTLTWQIDEWMQGDYYYVCQLHPSMNGIIRVLPSVSGYNGYYDLLSYWDYTVPAGGVPGKTDLQLRIRRGNNYYTGTGYLVSIEILNEAEGWSDDEAFTIPGSAIGGVSPDDDIVFGTNSLTTQQQNDRNGVCSLKVANVGAGSNFYQKYSDGAILKLEHDAGKTYGHTYYGFRMSSSNSYQIYIGSGVAWNYLNYYPGSSTWDRQGRWGGQRGLDVPADNIDMDNDSTWYEAHSICTSSTPTSYPLKIVTHKATSPQDTNFATITFVQTINSIDYAYLCFSPLKGTAVGSGVWDLDYVWNGTYLTVQPDSYGSDENIRLATFFPWRYDAADESVVGSTQAVKREAFWGYRRDASANNNYIYYWADYYSNNIHAYQSNNVSQYLGYYRNSTYDFTTVNEQNSTLDNVNDAVQSISVDSTANYYRPFKGLPLNGHMLPCPYYLPDDFTIIQYAVTPGATAFVTGDTITVSAGEVYEIIHVYYATNQTALDGVAGNTSKGIAFCARTT
Physico‐chemical
properties
protein length:767 AA
molecular weight: 85238,27670 Da
isoelectric point:4,65389
aromaticity:0,14081
hydropathy:-0,45033

Domains

Domains [InterPro]
DC_0856
STR
5–767
DC_0856
IPR008972
STR
197–304
IPR008972
IPR008972
STR
202–300
IPR008972
QPB08160.1
1 767
Architecture
STR
STR 5-767
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB08160.1
1 767
Domain Start End Length (AA) Confidence
N-terminal 1 30 30 0,7257
Central domain 31 463 434 0,8773
C-terminal 464 767 303 0,4591
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-30
Central
31-463
C-terminal
464-767

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H9-1
[NCBI] 		2783674 Uroviricota > Caudoviricetes > Pantevenvirales > Scyllavirus > Scyllavirus aitchnine
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB08160.1 [NCBI]
Genbank nucleotide accession
MW117966 [NCBI]
CDS location
range 80881 -> 83184
strand -
CDS
ATGGCAGTAACAAAGACAGAATATCTAGTCAATGGTGGCAACACTGGATGGTCGAAGAGTGATGTTATCTCTGCCTTAGAGACTGCATTTGCTGGACTTGGGTGGCATAGTGGCACAGCAAAGACTGGTGTTCCAACAACATGCTTAGCACCAGGAAGTGACCGACCAGTTTACGAAAGTGTTAGTAGCAATTGGCAATATGCTACTAGAATTTTACCAATTACTTTTCATAGGTATAATAGGTATTATGACATTACCAATAATGGATCTACTAGTTGGTCTGTAAAACGAAGAGAAGATATTAATTATATCTACGGTCCAAACTATGCAGGCAATGAAGGTTGGATTAGAATGTACGATATCGCTGACATTGCTACAGGAACTGCTGCAGTTTATCGTGCTGGAGCTAACACTATTCCAAACAGAAATGGAACTACAGATCCTATGTTTGTAGATGGACAGACATACTATATTATTAATATTGGCGATGATGATTGGGTCAGACTAGCAGACAGTGAAGCAGATGCTCTTGCTGGAACATACATTGAACCTGTCAATGGCTCATGGTCTGGTGATTATGGTAGATTTGAAATTGATTTGGGAACTAATCCAGTTCTTACAGTAAGACAGGGTGATACTATCAATTTTTCAAATAATTCAACTGGACATCCTCTATACATTCAGGATCAGTCTGGAGCATATAACTCATCTAGAGTATTGAATAATACAAATTATCGTACTCAATCTTATAGAGATTTCCCGAGTAACCAAGGTATTGAGATTGGAACACTAACATGGCAGATTGATGAATGGATGCAAGGTGATTATTATTATGTGTGTCAACTTCATCCATCAATGAATGGAATTATAAGAGTATTGCCATCAGTATCTGGATACAATGGTTATTATGATTTGTTATCATACTGGGATTATACTGTACCTGCTGGCGGAGTCCCAGGTAAAACAGATCTTCAGTTAAGAATTAGGAGAGGAAATAACTACTATACTGGTACTGGATATTTGGTATCGATTGAAATTCTAAACGAAGCAGAAGGATGGTCTGATGATGAAGCATTTACTATTCCTGGTAGTGCAATTGGTGGTGTCAGTCCAGACGATGATATTGTATTTGGAACTAATAGTCTGACTACACAACAACAGAATGATCGTAATGGTGTATGTTCTCTGAAAGTTGCTAATGTAGGAGCAGGTAGTAATTTTTATCAGAAGTATAGTGATGGTGCAATTCTAAAACTAGAACATGATGCTGGAAAAACTTATGGGCATACTTACTATGGATTTAGAATGTCTAGTTCCAATAGTTATCAAATTTATATTGGATCTGGGGTAGCATGGAACTATCTAAATTATTATCCTGGTAGTTCTACTTGGGATAGACAAGGAAGATGGGGTGGACAGAGAGGATTGGATGTTCCAGCAGATAATATTGATATGGACAATGATTCTACTTGGTATGAAGCACACAGTATTTGTACCAGTTCAACACCAACCAGTTATCCACTGAAGATTGTTACTCATAAAGCAACATCTCCACAAGATACTAATTTTGCTACTATTACATTCGTACAAACAATCAATAGTATTGACTATGCATACCTTTGTTTCTCTCCACTGAAAGGAACTGCAGTTGGATCGGGAGTATGGGATTTGGATTATGTCTGGAACGGAACGTATTTGACTGTTCAACCTGATTCATATGGCAGTGATGAAAATATTAGACTAGCAACATTTTTCCCTTGGAGATATGATGCTGCAGATGAAAGTGTTGTTGGCAGCACACAGGCAGTAAAACGTGAAGCATTCTGGGGATACCGACGTGATGCTAGTGCTAATAATAATTACATCTATTATTGGGCTGATTATTACTCAAATAATATTCATGCATATCAATCTAATAATGTCTCTCAATACCTTGGATACTATAGAAACAGCACTTATGATTTCACTACAGTGAATGAACAAAATAGCACACTCGATAATGTAAATGATGCTGTCCAAAGTATTTCTGTAGACTCTACAGCAAATTACTATAGACCATTCAAAGGGTTACCATTGAATGGACATATGCTTCCATGTCCTTATTATTTGCCAGATGATTTCACAATCATTCAGTATGCAGTCACTCCTGGTGCTACTGCTTTTGTGACTGGAGATACTATTACTGTTAGTGCTGGTGAAGTATATGAAATTATCCACGTTTATTATGCAACAAATCAGACTGCATTGGATGGCGTTGCTGGTAATACATCCAAGGGTATTGCATTCTGTGCGAGGACAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e871cc9eb4b2fc4975017e3d70934ff92e197abf7bceedbdc26cb4991657c026
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3599
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H9-1 from the Yellow Sea, China Jiang,T. 2019-04-04 — GenBank