Protein

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Genbank accession
QIN97204.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAISRISGNQISTSTEAIITTLTFLNSNSVLRIPAGTTAQQPTGVSAGTIRFNTDLDAAEIYKADDGTGNPGWSPISGGGPSLGTDSIIRTNGTTISENITVGATANGDVKYSNGMSAGPITIASGFTVTVESGAAWSVR
Physico‐chemical
properties
protein length:140 AA
molecular weight: 14140,42570 Da
isoelectric point:4,61154
aromaticity:0,05000
hydropathy:-0,02000

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H25
[NCBI] 		2718941 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN97204.1 [NCBI]
Genbank nucleotide accession
MT162468.2 [NCBI]
CDS location
range 27668 -> 28090
strand +
CDS
ATGGCAATTTCAAGAATTAGTGGAAATCAAATTTCCACCTCTACAGAAGCAATTATTACTACGCTAACGTTTCTTAATAGCAATAGCGTATTAAGGATTCCTGCTGGAACAACAGCACAACAACCTACAGGTGTTTCTGCTGGTACAATTAGATTCAATACCGATTTAGATGCTGCTGAAATTTATAAGGCAGATGATGGAACTGGCAACCCTGGATGGTCGCCTATTTCTGGTGGTGGACCATCGTTAGGAACTGACAGTATTATTCGTACTAATGGAACAACAATTAGTGAGAATATTACTGTTGGTGCAACAGCAAATGGTGATGTAAAGTATTCAAACGGAATGAGTGCAGGTCCCATCACAATTGCAAGCGGTTTTACTGTTACTGTTGAGAGTGGTGCTGCTTGGAGTGTTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a5e0b55511c09cb6c8d4e934e24916bbd38884cbd6551184e6ec6275b74c0970
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8898
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H25 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank