Protein

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Genbank accession
YP_012233315.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MGKITGKVNYKEVLKGDIGYTFEPHVTVDGVLYWTNNGNLENPLPVNLHGKQGFMFIPHVDDEGNLSWTNTGELENPPTVNIKGDKGYFYTPHISEDGILSWSNNGNLENPQPFNISDLILNEVKESRVDTTGKTFTKLKERLDSDFKKLSESIKNNDTKDEVVQARTATTGENFMTLDDRIDHEVMRLREKIEVTMLEQEDKESHDISNTIDGVCSDMIIKGKTIKLDNDEIKSFGQQENKISILSHSKNLCDVRKAYTDYTGFSFVTDSNKLSINGTTDNKWAYVGIPVKLRPNIDLTFSFKGSGNNNFLKANIILESNKNNSLTGDISANSSTTFRVNERCTVIIKLFFSGATTGNFNVDYWDIQLEEGTQSTPYEPYKEDKKDILLSSLGFDEGLRGLNLTVCDELNGIKNVAIKRVEKHSFTGNENISLHDTQTETISFRYLNDTHITSWEKPSNLLCTSLPSIGNKIYESNNVGCASDNIGFIFRLNKNSLTSQDVEGFRKWLKANPTTIYYELAEPIETPLTDTINAKAFNDRTYINFENSIKGTSSFKVPVNTNKLINDLKFEKEDLKEKFNNLTNEFENFKTYMIQTLPYKEV
Physico‐chemical
properties
protein length:602 AA
molecular weight: 68198,43550 Da
isoelectric point:5,16652
aromaticity:0,09302
hydropathy:-0,60332

Domains

Domains [InterPro]
DC_0125
ATT
94–161
DC_0125 Coil
DC_0125
ATT
155–347
DC_0125
YP_012233315.1
1 602
Architecture
ATT
ATT 94-347 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012233315.1
1 602
Domain Start End Length (AA) Confidence
N-terminal 1 566 566 0,5592
Central domain 567 591 26 0,0139
C-terminal 592 602 10 0,9733
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-566
Central
567-591
C-terminal
592-602

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage vB_CpeP_PM11
[NCBI] 		2970322 Uroviricota > Caudoviricetes > Guelinviridae > Gregsiragusavirus > Gregsiragusavirus pm11
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012233315.1 [NCBI]
Genbank nucleotide accession
NC_107625 [NCBI]
CDS location
range 2559 -> 4367
strand -
CDS
TTGGGTAAAATAACAGGAAAAGTTAATTATAAAGAAGTGTTAAAAGGTGATATTGGTTATACGTTCGAACCCCATGTTACAGTTGACGGCGTTTTGTATTGGACAAATAACGGTAATTTAGAAAATCCATTGCCAGTAAATTTACATGGTAAACAGGGGTTTATGTTTATTCCTCATGTTGATGATGAAGGTAATTTATCGTGGACAAATACAGGGGAACTTGAAAACCCACCAACTGTAAATATTAAAGGTGATAAGGGTTATTTTTATACGCCTCACATTTCAGAAGATGGAATATTATCATGGAGTAATAATGGTAATTTAGAAAACCCACAACCTTTCAATATTTCTGATTTAATATTAAATGAAGTGAAAGAAAGTAGAGTTGATACAACTGGTAAAACATTTACTAAGTTAAAAGAAAGGTTAGATAGTGACTTTAAAAAACTAAGTGAATCAATAAAAAATAATGATACAAAAGATGAAGTAGTACAAGCACGTACAGCTACTACAGGCGAAAATTTTATGACTTTAGATGATAGAATAGACCATGAAGTTATGAGATTAAGAGAAAAAATTGAGGTTACAATGTTAGAACAAGAAGATAAAGAAAGTCATGATATTTCTAATACTATTGATGGTGTGTGTAGTGATATGATTATAAAAGGGAAAACTATAAAACTTGACAATGACGAAATAAAATCCTTCGGTCAACAAGAAAATAAAATTAGTATTTTAAGTCATAGTAAGAATCTATGTGATGTTAGGAAAGCCTATACAGATTATACTGGATTTTCTTTTGTTACAGATAGTAATAAACTTTCAATAAATGGAACAACAGATAATAAGTGGGCTTATGTAGGAATCCCGGTTAAATTAAGACCTAATATAGATTTAACTTTTAGTTTTAAGGGAAGTGGAAATAATAACTTTTTGAAAGCTAATATTATTTTAGAAAGTAATAAGAATAATTCCTTAACTGGGGATATAAGTGCAAATAGTTCTACAACATTTAGAGTAAATGAAAGATGTACTGTTATAATAAAATTATTTTTTAGTGGGGCAACAACTGGTAATTTTAATGTAGATTACTGGGATATTCAACTAGAAGAAGGAACTCAATCAACGCCATACGAACCTTACAAAGAAGATAAAAAAGATATTTTATTGAGTTCTTTAGGTTTTGATGAAGGACTTAGAGGACTTAATTTAACTGTATGTGATGAATTGAATGGTATAAAAAATGTAGCTATTAAAAGAGTTGAAAAACATTCTTTTACTGGTAATGAAAATATTTCTTTACATGATACTCAAACAGAAACTATTTCATTTAGATATTTAAATGATACTCATATTACATCATGGGAGAAACCAAGTAATTTATTATGTACATCACTACCTAGTATTGGTAATAAGATTTATGAGTCTAACAATGTTGGTTGTGCAAGTGATAATATTGGTTTTATTTTTAGATTAAATAAAAATAGTTTAACATCACAAGATGTAGAAGGATTTAGAAAATGGTTAAAAGCTAATCCAACTACTATTTATTATGAATTAGCTGAACCAATCGAAACACCATTAACAGACACTATAAATGCTAAGGCTTTTAACGATAGAACTTATATAAATTTTGAAAACTCTATAAAAGGAACAAGTTCATTTAAAGTACCAGTAAATACTAATAAGTTAATAAATGATTTAAAATTTGAAAAAGAGGACTTGAAAGAAAAGTTTAATAATTTAACTAATGAGTTTGAAAACTTTAAAACTTATATGATACAAACATTACCATACAAGGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d77098ddf2983a4015072d78a8e9d6fd44ebaa706e9020486e58db2d42f44276
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6923
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50