Protein

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Genbank accession
AFC21670.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MYSIKTDLGVSGNQTISKDLLVSGSAVIANDLTVNGTVNFANATFTQITVTGTANLNNVNSTGTAALNNVQVSGNTTLGNSDTDTVTVNGTSTFNAPITAKSNVSIEGNTVVGNASTDTLTVNATSTFAAPAIFNKDVTVGASSTDALTVNSTTDFKNSVTIGENATDILTVNSTANVKNNLTVDGVTNLKGNTIVGDASTDTLTVNAASNFKNNVVIGEDATDTLTINSATTINGNISVTGSTELESLVVNGTSNLKGDLVMGTGTTASFEDVIINGNLSGNFTLANGNFQTITVSGQSNLNSVVLSGNITGTTRSATFQTYNVAGASGVIQFTYNDPARPSDIKSAIEPYKISSNTFQGKTADIDRIEVGDVTFNDYGLTAKGKSSIDYLDIVGNSTTGTTRPQLTVSGTSNFTGAVTVHDLNITGAVTGLSFTDLNVTGDLNVAGTSDFTQKATFVDLDSTGTATLNDVVINGTLTGGFTIANGNFQTLTVSGQSSLSSVVLSGNVTGTTQSATFQTYNVAGQTGVIQFSYNDPARPSDIKSAIEPYKISSNTFQGQIADMDRITVGDVTFSTPGLTAAGIAKIDYLDIVGNSTTGTTRAQLTVAGKTVLNDLEVNGTVSGITFDLTGQDISLNSLTATTSVNAASVTTTGQVSSGSLSVTGGSVLGGNVTVNGQTITVKDLVVTGTTTGITASANVDGLDIAPNSVAVDTTLTVDGTSTLKGVSATALTVTGASTLAGVTATTLSTSGLATLNSLTVTGASTLAGVTATTLTVPTINGNTTFANNVTVTGTLTPSAIDLSTTNVNAQSLTTTGDVIVGGDLAVTGTFDLSASDVSVKSISATSASTLPTLNSTTATIGTVNATALTVSGATSLAGVTAGAVTASSLDTATITHTGGVTFGSAVTMSDDLTVNGTLVLAGGLDLSAVDIDAQSIHTTGNATIDGNITATGATVNIAKNTSITGNLSVSGTVTPGAIDLSNADVTVKTLTSSGDAHIVGDLTVDGQFDLSATNLAAASLASSGNTTVGGNLVLTTGVITGAPQISGNTTIGGTLGVTGATTVSTLTATGASTLAGVTATSLTVPSITGNTTFANNVTVTGTFTPSGGLNLSGADISANSLTLASTLNVTGLTTLAGVNSGNHSITGTLGVTGASTLAAVTVGNTLTVAGNTTLSGNLTVNGATTTLKAANANSIKIGTGTANSGVILDVFGNTTITGDLNVTGIINAAIDLTSRDIAPRNVTASGSISSASSITAATSLTAATAIIGANGSTNNNLQVNGNVVTNGDFTVTGVINGTLNQTNSDVTFKSVTTTAGATIGTNATVGGTLGVTGVTTLGIVNSGNHAITGTLSTSGLATLNSASITTTLGVTGATTLSTLSTSGLATLNSATITGALTANGNTTIGDASADTLTVNATSTFAGAVTVNNITVNGTLNANLSNLVTTSFKTGTYFVKQHAQETVSTTTYTPDGTSNVYNVTVSSNTSIQPITGAAAGGAGSWFIYITQDATGGRTVTWDSSYKIIGGEVNTTANAVSICQVVYCGIGSIFDVFIAQRP
Physico‐chemical
properties
protein length:1557 AA
molecular weight: 154061,51000 Da
isoelectric point:4,16217
aromaticity:0,03725
hydropathy:0,21554

Domains

Domains [InterPro]
IPR006626
Unmapped
67–90
IPR006626 IPR006626 DC_0092 IPR006626 IPR006626 DC_0092 DC_0092 IPR006626 IPR006626 DC_0931
IPR006626
Unmapped
416–437
IPR006626 DC_0092 IPR006626 DC_0092 IPR006626 DC_0092 IPR058970
IPR006626
Unmapped
1476–1497
IPR006626
AFC21670.1
1 1557
Architecture
STR
RBD
STR 181-1211 | RBD 1217-1557
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_GAP32
[NCBI] 		1141136 Uroviricota > Caudoviricetes > Mimasvirus >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
d4ad29cb3d17bc143856efa804aeb96acf785b447ead48a9eec4d4ecfd07d072
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5682
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50