Protein

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UniProt accession
A0A8S5VEU1 [UniProt]
Protein name
Nucleoid-associated protein
RBP type
TSP
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MKIIADINKVVLQDFEPLISGAYRDKTIDVELSADYDGLSVWAIFDRQTVKVEGGKCYTPTLERGTCSVGIYAVRLNDDKEIDLRYSPAPALINIEQGSYNSSLNSATAPTESEVERIYALIDEAIKAGMLKGEKGDPGTPGKDGAPGKDGTPGKDGYTPIKGVDYFDGVKGDKGEKGDPSVIAIDDSTFNMWNMGDAIYCTKEEVTIKSDSDNESTIVVPQGTLIASYKPKPYFGNAYHYLIIIGECTFKDKKYKYGIHRYYNITDEIVSSTSFDDFALKTEIPTKTSQLTNDNDFVSDADYTHTDNNFTDAEKLKLGSLVNYDDTEIKKQIAIKQDALTAEQLKNISNVPNKIDKTAVGNGLKFADGKLQLDIPVATSDTGYGG
Physico‐chemical
properties
protein length:386 AA
molecular weight: 42223,62670 Da
isoelectric point:4,66076
aromaticity:0,08808
hydropathy:-0,48523

Domains

Domains [InterPro]
DC_1701
STR
8–377
DC_1701
IPR008160
STR
132–179
IPR008160
A0A8S5VEU1
1 386
Architecture
STR
STR 8-377 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5VEU1
1 386
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,9929
Central domain 186 375 191 0,4842
C-terminal 376 386 10 0,0745
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-375
C-terminal
376-386

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctbxa26
[NCBI] 		2825568 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG05282.1 [NCBI]
Genbank nucleotide accession
BK016254 [NCBI]
CDS location
range 7131 -> 8291
strand -
CDS
ATGAAAATCATAGCAGATATTAATAAGGTCGTACTTCAGGACTTTGAGCCGCTCATCAGCGGAGCATACCGAGACAAGACCATTGATGTTGAACTCTCCGCAGATTATGACGGATTGTCCGTGTGGGCAATCTTTGACCGACAGACGGTCAAGGTCGAGGGCGGCAAATGCTACACTCCCACCCTTGAAAGAGGAACTTGCTCGGTTGGCATTTACGCCGTTCGTCTCAATGACGATAAAGAAATCGACCTGCGCTATTCCCCTGCCCCTGCATTAATTAATATTGAGCAGGGGTCGTATAACTCCTCGCTCAATTCTGCTACCGCCCCGACAGAATCGGAGGTTGAGCGGATATACGCATTGATAGACGAAGCAATTAAGGCAGGAATGCTCAAAGGCGAAAAAGGCGACCCGGGAACTCCGGGAAAAGACGGCGCACCGGGCAAAGACGGAACACCGGGCAAAGACGGCTACACGCCGATTAAAGGTGTTGACTACTTTGACGGTGTTAAGGGTGATAAGGGCGAAAAGGGAGACCCCAGTGTTATTGCTATTGATGATTCGACATTTAATATGTGGAATATGGGCGATGCAATATACTGTACAAAAGAAGAAGTAACTATTAAATCGGATAGTGATAACGAAAGCACTATTGTTGTGCCTCAAGGAACATTAATTGCTTCTTATAAACCAAAGCCGTATTTTGGTAACGCTTATCATTATTTAATAATCATAGGCGAATGTACTTTTAAGGACAAAAAATACAAGTACGGCATTCATCGGTATTACAATATTACGGATGAAATTGTAAGTTCTACAAGTTTTGATGATTTTGCATTAAAAACAGAAATCCCAACAAAAACAAGTCAGCTTACTAATGATAATGATTTTGTTTCGGATGCCGATTATACACACACGGATAACAATTTTACTGACGCTGAAAAGTTGAAACTCGGCAGTCTTGTAAATTATGACGATACCGAGATAAAAAAGCAAATTGCAATAAAACAAGATGCTTTAACCGCCGAACAACTTAAAAACATTTCTAATGTGCCGAATAAGATTGATAAAACGGCAGTCGGCAACGGCTTAAAATTCGCTGACGGCAAGCTGCAACTTGACATTCCTGTTGCGACATCTGACACAGGCTATGGAGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
48b55a7754c9e98c6d16b8f9565e3eb779e5ab8c257428799f227b8a094de6e8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5989
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50