Protein

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Genbank accession
XZO21817.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MARFKNPETIHVVDGVETVFSLDFPFLRREDVFVQVDKILTTDYTWVDNTNIQLAEVPKQGQEVRIFRDTPAQVPDTQFSQGIPFLPRYIDANNKQLLYAVQEGINTANLALDGVLDAIRIAEEARRLAQEALDAANEALRRALGFAEIRTVTEDSDIDPSWRGYWNRCITADKPLTLTMQMEDPDAPWIEFSEVHFEQAGVRDLNIVAGPGVTINRLQNTTMQLYGENGVCTLKRLGPNHWIVFGAMEDE
Physico‐chemical
properties
protein length:251 AA
molecular weight: 28424,68750 Da
isoelectric point:4,58636
aromaticity:0,08765
hydropathy:-0,29681

Domains

Domains [InterPro]
IPR005604
ATT
12–117
IPR005604 Coil
DC_0220
STR
12–251
DC_0220
XZO21817.1
1 251
Architecture
ATT
STR
ATT 12-117 | STR 118-251
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage 20176-6-3
[NCBI] 		3373966 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZO21817.1 [NCBI]
Genbank nucleotide accession
PQ510352.1 [NCBI]
CDS location
range 36108 -> 36863
strand +
CDS
GTGGCTCGGTTCAAGAACCCCGAGACCATCCACGTTGTAGATGGGGTCGAGACTGTATTCAGTCTCGACTTCCCATTCCTGCGTCGTGAGGACGTATTCGTCCAGGTCGACAAGATACTCACCACCGACTATACGTGGGTGGACAACACCAACATTCAGCTTGCGGAAGTGCCTAAGCAGGGCCAAGAGGTCCGCATCTTCCGCGACACCCCCGCCCAAGTGCCGGATACGCAGTTCAGCCAGGGCATCCCGTTCCTGCCTCGCTACATCGACGCGAACAACAAGCAGCTTCTGTACGCCGTGCAGGAGGGCATCAACACCGCGAACCTCGCACTGGATGGTGTTCTCGACGCGATCCGTATCGCCGAGGAGGCCCGCCGCCTTGCACAGGAGGCACTCGACGCCGCTAACGAAGCGCTGCGCCGCGCCCTGGGCTTCGCCGAGATTCGCACCGTTACGGAAGACTCGGACATCGACCCGAGCTGGCGTGGTTACTGGAACCGCTGCATCACCGCTGATAAGCCGCTGACCCTGACCATGCAGATGGAAGACCCGGATGCACCCTGGATCGAGTTCAGCGAGGTTCACTTCGAACAGGCGGGTGTGCGCGACCTCAACATCGTGGCCGGCCCCGGCGTGACCATCAACCGGTTGCAGAACACCACCATGCAGCTCTACGGCGAGAATGGCGTGTGTACCCTCAAGCGTCTCGGGCCTAACCACTGGATCGTGTTCGGAGCCATGGAGGACGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5d4f922dd279482e3e1dec4ab13b3cb96173e7b0e78a9b0c59dc804db8232e1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9061
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage training: Pseudomonas aeruginosa Burke,K.A., A Filippov,A.A., Nikolich,M.P. and Peters,T.L. 2023-12-18 — GenBank