Protein

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Genbank accession
AVH85019.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MSFKTFLESAMDSNGFFTDMKSIMLFLQKHRTSQFKPDATTKQVQLYAATFTNVEEDHLPIRISKADNITIKYSKITSLFGLPSDLDRLIITGCVDLNEVSESNGLPRTHINLTLNAVGVNQLDLDQIESPSIQINECDNLESVHGGERHDLAPSTLNFFNCANLKKINVNLSGASKILSIDNCNNFKFGEDSIFNANILKLDGNLSLSGISISAPAVQYIQFYNLDGITNILSLAEIDSLRMVSMVDGDNSKDWLSIVNAHLRKDNRDMFDLQSELIDAGYESIAQL
Physico‐chemical
properties
protein length:288 AA
molecular weight: 31992,78870 Da
isoelectric point:4,75341
aromaticity:0,07292
hydropathy:-0,13889

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVH85019.1
1 288
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,0721
Central domain 121 277 158 0,1996
C-terminal 278 288 10 0,9824
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-277
C-terminal
278-288

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RsoM2USA
[NCBI] 		2070027 No lineage information
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVH85019.1 [NCBI]
Genbank nucleotide accession
MG752970 [NCBI]
CDS location
range 66788 -> 67654
strand -
CDS
ATGAGCTTCAAAACATTTCTAGAGAGTGCTATGGATTCAAACGGTTTCTTCACCGATATGAAGTCCATCATGCTGTTTTTACAGAAGCATCGAACAAGTCAATTCAAACCAGATGCAACTACCAAGCAAGTGCAGCTATATGCAGCCACGTTCACGAATGTTGAAGAAGATCACTTGCCTATAAGAATTAGTAAAGCCGATAACATCACTATCAAGTATTCTAAAATAACCAGTTTGTTCGGTCTTCCATCGGATTTAGACAGATTGATCATAACTGGATGCGTGGATTTGAATGAGGTCAGTGAGTCAAACGGTCTGCCCAGAACGCATATAAATTTGACACTGAATGCAGTTGGCGTAAATCAATTGGATTTGGATCAGATTGAATCCCCCTCCATACAAATTAATGAATGTGATAATCTAGAATCCGTTCATGGCGGAGAACGCCACGATTTAGCACCATCAACTTTAAATTTTTTCAATTGCGCAAATCTTAAAAAGATAAACGTCAATTTATCCGGTGCTAGCAAAATATTGAGCATTGACAATTGCAACAATTTTAAATTCGGTGAAGATAGCATCTTCAATGCCAACATTCTTAAATTGGATGGAAATTTATCATTGTCTGGAATTTCAATAAGTGCTCCAGCTGTACAATATATCCAATTCTACAATCTAGATGGAATCACCAATATTTTAAGTTTGGCAGAAATTGATAGCTTAAGAATGGTGTCAATGGTGGACGGTGATAACAGCAAAGACTGGCTTTCAATTGTAAATGCGCATTTACGTAAAGACAACCGCGATATGTTTGATCTCCAGTCTGAGCTTATTGATGCTGGATATGAGAGTATCGCACAACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
426df3c314aab40e29c0d259a085dbe9b2294056f6f5eca6d96d93b749598de0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7875
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of RsoM2USA, the largest bacteriophage infecting plant pathogenic bacterium Ralstonia solanacearum Ahmad,A.A., Addy,H.S. and Huang,Q. 2021-09-27 — GenBank