Protein

View in Explore
Genbank accession
ARQ95366.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPAAFGLASRYPFYPSYIDNGGGNRVASLGWSPFDQPAYAACRNGTQLWVALNGNDTTGTGTFAAPFATLDKAQTVLNAGGVPGTIIGYVAATNEEHRRLFGGQITVKPTVDTAYLAKNGIWRAGIYDQLTWSQNTGTFAALTGNPNVWAAARSVFGSAWNPQMFDGMGYPIRYTPVGSVAAVNRIPGSVYSDGTNVYISTFDGANPSDSNVRVNLNLSAIAWTSFNTPVNVYFDGETAGDGWAFDGACQIAATALWGSLKTIALRRCSFSRNTGNSYSFEGINGLVWVENCSGISSGVDVYNFHNVMGADMTGVVLNSTAVGAGRTAGSQSNNCITGHENCKVISGGNRFEDSSGGNIRFIDASKLLSFADYISGDKGDIWQGGTMPATEVRTDGTATIWMFDPIIEPRRPSTFAMYATSASKILTRGVSALRGLIGGAGFFGKW
Physico‐chemical
properties
protein length:446 AA
molecular weight: 47223,09360 Da
isoelectric point:6,31563
aromaticity:0,11659
hydropathy:-0,07713

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARQ95366.1
1 446
Domain Start End Length (AA) Confidence
N-terminal 1 43 43 0,3360
Central domain 44 435 393 0,9233
C-terminal 436 446 10 0,0910
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-43
Central
44-435
C-terminal
436-446

Taxonomy

  Name Taxonomy ID Lineage
Phage Bradyrhizobium phage BDU-MI-1
[NCBI] 		1983459 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bradyrhizobium diazoefficiens
[NCBI] 		1355477 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARQ95366.1 [NCBI]
Genbank nucleotide accession
KY940711 [NCBI]
CDS location
range 89942 -> 91282
strand -
CDS
GTGCCTGCGGCCTTCGGGCTCGCCAGCAGGTATCCATTCTATCCGTCCTACATCGACAACGGCGGCGGCAATCGCGTCGCCTCGCTCGGCTGGTCTCCGTTTGATCAGCCGGCCTACGCGGCCTGCCGCAACGGCACCCAGCTCTGGGTCGCACTGAACGGAAACGACACGACCGGCACCGGCACTTTCGCTGCGCCGTTTGCGACGCTCGACAAGGCGCAGACCGTGCTCAACGCGGGCGGAGTACCGGGCACCATCATCGGCTACGTCGCCGCAACGAACGAAGAGCATCGTCGGCTCTTCGGCGGGCAGATCACGGTCAAGCCGACCGTCGACACCGCCTATCTCGCGAAGAATGGCATCTGGCGCGCTGGTATCTACGACCAGCTCACCTGGTCCCAGAACACCGGAACGTTCGCTGCTCTGACTGGCAATCCCAACGTCTGGGCCGCAGCCCGCTCGGTGTTCGGCAGCGCCTGGAACCCGCAAATGTTCGACGGCATGGGCTACCCGATCCGGTACACTCCGGTCGGCTCGGTCGCAGCCGTCAACCGCATCCCTGGCTCTGTCTACTCGGACGGCACCAACGTCTACATCTCGACGTTCGACGGCGCCAACCCGAGCGACAGCAACGTCCGCGTCAACCTCAACCTGAGTGCGATCGCCTGGACCAGCTTCAATACCCCGGTCAACGTCTATTTCGACGGCGAGACTGCTGGCGATGGTTGGGCCTTCGACGGCGCCTGTCAGATCGCGGCGACCGCACTGTGGGGATCGCTCAAGACGATCGCATTGCGGCGCTGCTCGTTCAGCCGCAACACGGGCAACTCGTACTCGTTCGAGGGCATCAACGGCCTGGTCTGGGTTGAGAATTGCTCTGGCATCTCGTCTGGTGTGGACGTCTACAACTTCCACAACGTGATGGGTGCCGACATGACTGGCGTGGTGCTGAACAGCACTGCCGTTGGCGCAGGTCGTACCGCTGGCTCTCAGAGCAACAACTGCATCACCGGACACGAGAACTGCAAGGTCATCTCTGGAGGTAATCGGTTCGAGGACAGCTCGGGCGGAAACATCCGCTTCATCGACGCATCGAAGTTGCTGTCGTTTGCCGACTACATCTCTGGCGACAAGGGCGACATTTGGCAGGGCGGCACGATGCCGGCCACCGAAGTTCGCACCGACGGCACTGCAACGATCTGGATGTTCGATCCCATCATCGAACCCCGTCGACCCAGCACGTTCGCGATGTACGCGACGTCAGCTTCGAAGATCCTCACCCGCGGCGTGTCGGCACTCCGTGGCCTGATCGGCGGCGCCGGCTTCTTCGGCAAGTGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fc74fdb02bc53294dab899150dd493a3abf97410f97d8ae8b018165f8c8c4e9c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8105
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel bacteriophage infecting Bradyrhizobium diazoefficiens USDA110T Liu,J., Yu,H., Huang,Y., Yu,Z., Fan,G., Jin,J., Liu,X. and Wang,G. 2017-07-27 — GenBank