Protein

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Genbank accession
AMS03107.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSPPPEGRDRHYWPEGEPAADRLGATQVIPSRGAPKITMPPPQSEDRMSLREKANAIFGEIGTRYEVTEVADNIKNAATGGSTKIGGGLGASVFDAVANLFGLADNAEKIAMAAQQQLQDITNETNTPGWSGYAWSSIFSGADGTPLPSTDWSTTNIIIAGDDGHAGLLHNSPDGSHLAVTQPIHQFTTDSQSASVVLGNKIFGSEDRWTTIRLRCNAAGTEGAVCWVRPGSIRIGRISGGTTTVWTTISPNTKSGDIVRFRCHGDNYYVLLNGVVILSWTDVGASVSKGAAFRHAAFSQEYLNGAFYDQASFRIASWAMADWLPPGGAVTTPSWQLRRGTNTALALTVAHGGQALLPNNFYTITDRSTDVVIDLATGAATIQTAGWYEISATSMNRDDNGDEGFSGTPNGNTINAWRSSPWVLFVDGSAMIGPVMSGVAVKVYLAAGNVVRTGVAASSPNYPTTRSGDGEVVNLTATSNISHVSGGPSASFTGRKLPD
Physico‐chemical
properties
protein length:499 AA
molecular weight: 52570,72160 Da
isoelectric point:5,51090
aromaticity:0,08016
hydropathy:-0,20982

Domains

Domains [InterPro]
DC_0667
STR
17–480
DC_0667
Coil
Unmapped
104–124
Coil
AMS03107.1
1 499
Architecture
STR
STR 17-480 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMS03107.1
1 499
Domain Start End Length (AA) Confidence
N-terminal 1 314 314 0,4058
Central domain 315 488 175 0,0232
C-terminal 489 499 10 0,9969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-314
Central
315-488
C-terminal
489-499

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Obliviate
[NCBI] 		1821559 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMS03107.1 [NCBI]
Genbank nucleotide accession
KU963254 [NCBI]
CDS location
range 23302 -> 24801
strand +
CDS
ATGTCACCCCCACCGGAGGGGCGGGACCGCCACTACTGGCCCGAGGGCGAACCGGCGGCCGATCGCCTCGGCGCGACTCAGGTGATCCCGTCACGCGGCGCACCGAAGATCACAATGCCGCCGCCGCAGTCCGAGGACCGCATGTCGCTGCGGGAGAAGGCGAACGCGATCTTCGGTGAGATCGGCACCCGGTACGAGGTGACCGAAGTCGCCGACAACATCAAGAACGCGGCGACCGGCGGCAGCACGAAGATCGGCGGCGGACTCGGCGCGTCGGTGTTCGACGCCGTCGCCAATCTCTTCGGCCTCGCGGACAACGCCGAGAAGATCGCGATGGCCGCCCAGCAACAGCTGCAGGACATCACGAACGAGACCAACACCCCCGGCTGGTCCGGATACGCCTGGTCGTCGATCTTCTCCGGCGCCGACGGCACGCCCCTGCCTTCGACGGACTGGTCAACGACGAACATAATCATCGCTGGTGATGACGGGCACGCCGGGCTGCTGCACAATTCACCCGACGGCTCGCACCTGGCGGTCACCCAGCCGATTCACCAGTTCACAACCGACTCGCAGTCGGCGTCGGTCGTGCTGGGCAACAAGATCTTCGGGTCCGAGGACCGATGGACCACCATCCGGCTGCGGTGCAACGCGGCCGGCACCGAAGGCGCGGTCTGCTGGGTCCGTCCGGGCAGCATCAGGATTGGCCGCATCTCCGGCGGCACGACGACCGTGTGGACCACGATCAGCCCGAACACGAAGTCCGGCGACATCGTCCGGTTCCGCTGCCACGGCGACAACTACTACGTGCTGCTCAACGGCGTGGTGATCCTGTCGTGGACCGACGTCGGTGCGTCAGTCTCGAAGGGCGCAGCATTCCGCCACGCCGCATTCTCCCAGGAGTACCTCAATGGAGCGTTCTACGACCAGGCCAGCTTCCGGATCGCGTCGTGGGCAATGGCCGACTGGCTCCCGCCAGGGGGCGCGGTGACGACCCCGTCGTGGCAGCTGCGCCGTGGCACCAACACTGCGCTCGCGCTCACTGTCGCGCACGGCGGACAGGCGTTGCTGCCGAACAACTTCTACACCATCACCGACCGATCGACCGACGTCGTCATTGACCTCGCCACCGGTGCCGCGACGATCCAGACGGCCGGCTGGTACGAGATCTCTGCCACGAGCATGAACCGCGACGACAACGGTGACGAAGGGTTCTCTGGCACACCGAACGGCAACACGATCAACGCCTGGCGGTCCTCGCCGTGGGTGCTCTTCGTCGACGGCTCCGCGATGATCGGGCCAGTGATGTCCGGCGTGGCGGTGAAGGTGTACCTCGCAGCCGGGAATGTCGTCCGGACCGGCGTTGCAGCATCGTCCCCGAACTACCCCACCACCCGAAGCGGAGACGGCGAGGTAGTCAACCTCACCGCCACCTCGAACATCTCGCACGTATCAGGCGGCCCGTCCGCCTCGTTCACCGGAAGAAAGCTGCCCGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e26d9e7335e9d67f67932a2ec55da6bf27ee875ad17cccfec6b83825686afa99
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7393
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50