Protein

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Genbank accession
QEI24380.1 [GenBank]
Protein name
putative tail associated protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTAGSDFSGVLVPNDTFSLVAAWTNTDVDLSGGGYQVVSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSVPYGPIYTAQGTVSGRTPDYNGVTIYADLPVASRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGVKTETYDSKGIRNYKQAFWAAHRRHQKNILKKISVSFTATEEGIFALPNRAISVVKGSRMATYDGYITAVNGLTVELSQPVKFASGDDHSLVLKRRDGGVQSVNVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFNNGFN
Physico‐chemical
properties
protein length:644 AA
molecular weight: 71129,80980 Da
isoelectric point:5,50266
aromaticity:0,10093
hydropathy:-0,35854

Domains

Domains [InterPro]
DC_0016
STR
3–644
DC_0016
NF040662
Unmapped
144–624
NF040662
QEI24380.1
1 644
Architecture
STR
STR 3-644
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEI24380.1
1 644
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,9482
Central domain 21 219 200 0,6628
C-terminal 220 644 424 0,2132
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-219
C-terminal
220-644

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SS1
[NCBI] 		2592214 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEI24380.1 [NCBI]
Genbank nucleotide accession
MK972700 [NCBI]
CDS location
range 10967 -> 12901
strand -
CDS
ATGGTCGGAGACCCCATAGAGCAAGGCCTGTACATCACCGTAGAATCTAACGAAGTAGACGGCGTGGTTCTGAAAGCCCCCAACGGTCTCGGCATTTCTTTCTCTTACATGTCAGGGTATCCGTCTTTGTCAGGAAACATTGGCACTATATACGACCCAACAGCCGGCTCGGATTTTTCTGGAGTACTGGTGCCTAATGACACGTTTTCGCTGGTGGCCGCGTGGACAAATACAGACGTTGACCTGTCCGGCGGCGGGTATCAGGTAGTAAGCGTGTCCGAAGGGACTGTTACCTTTATAGTACCTGGTGGTCTAATTGGTAGGTGGCAAGAAATAAGACCTGGTTCGTTTTTCCGCGGTGATGGAGAGGCCTCGCTGCAACCAGACAACACGTATGAGAAAACCTTAACCGATTGGGTTTCAATAAACCGTACCGAGGTAGAACGCATTGTAGCCAATATCGCCGCCGCTAATGGTATGTATAAAGACAACGGAAAATCGAAAACACTGGCGTCGGTCACCGCTGAGATACAGTACCAGTTACTTGATGAAAACAGCGTTCCTTACGGGCCAATATACACGGCGCAAGGAACTGTGTCCGGGCGTACACCGGACTACAACGGCGTCACTATTTACGCTGACCTGCCGGTTGCGTCACGGGTGCGGGTGCGCGCCAGAAGGGTAACAGACCTGGACTTTAATTTCGAGGGGTCCGTAGTCGATGAGATAACGTACGTTAACTTATACGGGCAAACACGTGACAACACCCCACACTACGGCAACAGAACAACAGTACACTCGATGCGCAAGCAGACCCCCCGTGCTGCGGAAGTAAAGCAACCGCAGTTGCGTATGATTGCTACTGAAATGGTGTACAAATACCTCGGTAACGGTGTTTTCGAAGATACGATGACACCTAATACACAGGCTGTACAATCCCTCATCCGCCTGGCGCGTGACCCAGATGTGGGCGGTTTAAACCTGACAGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTTGGCGACAAACAGGCTGGAGAATTTTGTTACACGTTTGATGACTATAAAACCACTATGCAGGATATAGTTAGTACTATAGCCGACGCTATCTTCTGTACCCCATACAGGCGTGGGGCGGACATCCTTCTCGATTTTGAACGCCCTCGCATGGGCCCTGAGATGGTGTTCACCCACCGAAGCAAGGCTGGTACTTCCGAAAAATGGACCAGAACCTTTAACGATGCTCAGGTGTTCGATAGCCTTAAATTCTCGTACATAGACCCAAAAACAAACGTTAAAGAAACAATAACAATACCGGAAACTGGTGGGGTTAAAACGGAGACCTACGATTCAAAAGGTATTCGCAACTATAAGCAGGCTTTCTGGGCAGCGCACCGCCGCCACCAGAAGAACATTTTAAAGAAAATTTCAGTGTCGTTTACCGCCACGGAAGAGGGTATCTTTGCGCTACCAAACAGGGCCATTAGTGTAGTGAAAGGCTCCCGGATGGCTACCTATGACGGCTATATAACAGCAGTAAACGGCCTAACTGTTGAGCTGTCACAGCCTGTTAAATTTGCGTCAGGAGACGACCACTCTCTTGTTCTCAAGCGGCGAGACGGTGGCGTTCAAAGCGTTAATGTAGTCCCTGGAGCGCACGACAGGCAGGTGATTATGACTTCTGTACCGCAGGAAGCCATTTACACGGGTAATAGCGCCCTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACCGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCTAACGGATTCAATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2ade9790c5741a044306c22df16f3bb88da697aceddeaf5ed5695dbbe836b040
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Tremblay,D., Delaquis,P., Moineau,S., Goodridge,L., Levesque,R. and Wang,S. 2019-09-14 — GenBank