Protein

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Genbank accession
WXA36856.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTYATGNPLGSKDPRDLYDNAENFDAAMNDPVNTTWNDRFGVSRPTMKGYEEQFNDWLDAQGFEPGFLEYVDGSPLTVDRSTQLIQRGDNIYSVKRPASFPVNLTGNWATDQNLLVAQVDRTLQDTLATSAGAGMIGYRERTVADRLNDTANVKDYGAIADGAYHPLSERFATLAEAQAVYPHATALTDSIDWAAYQAAINSGAPHVHAPGGHYVMNRGTLAERDIRYTGDGYATRVDFSMADGPGSCMLTQGELVQIGDLSVSVVKGARTLTFATAPDLAPGDVVIVYNPTNGSWLADRDPYRAGEMWKVHSVSGSTVTIYGNSSSVYLFSEVDVYRMRGVRVSVDQMHFSPSDTYAIAPFRAVFGDGVKVSNYYASDVTRYTGLEVERCFDVSINAVSSPNRSPAVNDEYGITISNCHNFSVYGGYAAATRHAVALGGMDAVCCVPNRNGLIYGMHIEGIDIDSDIGAGDMHGNADKITYDNCEFRNGVILQGRDATVRNSTIYGVSSVSGEALYGTEVYGGTYTIENNRFISYGNGASFGIIHISPGTSQREALLIIARNNTFELPNATGSTKVLFLRGRNSPLPCSVNIDGMHVHMAPVAMQCFLFADDQVAATLNSNYLIIDGVYGPSGTYLLYPTSKNAAIPTRQMHQSGAVNVTTTASATVAAPAQTIRYPYSKIPNVSVQVSSQSGGDQSAIGSITPVAIAYNVQPNSIRPAIMAPSGSFAAGGSARLHWSASLDDI
Physico‐chemical
properties
protein length:746 AA
molecular weight: 80059,07540 Da
isoelectric point:5,06836
aromaticity:0,09249
hydropathy:-0,18378

Domains

Domains [InterPro]
DC_1559
ATT
1–174
DC_1559 IPR049350 IPR054136 IPR049350
IPR012334
STR
116–443
IPR012334 DC_1729
IPR011050
STR
281–549
IPR011050
WXA36856.1
1 746
Architecture
ATT
STR
ENZ
STR
ATT 1-174 | STR 175-549 | ENZ 550-636 | STR 654-746
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WXA36856.1
1 746
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,9931
Central domain 192 637 447 0,9942
C-terminal 638 746 108 0,9403
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-637
C-terminal
638-746

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Marin
[NCBI] 		3097005 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WXA36856.1 [NCBI]
Genbank nucleotide accession
OR683406.1 [NCBI]
CDS location
range 46803 -> 49043
strand +
CDS
ATGACGACCTACGCCACCGGTAACCCGCTGGGCTCCAAAGACCCGCGTGATCTGTACGACAACGCCGAGAACTTCGACGCGGCGATGAACGACCCGGTAAATACCACGTGGAATGATCGTTTCGGCGTTAGCCGCCCAACGATGAAAGGGTATGAGGAACAGTTCAACGACTGGCTGGATGCTCAAGGATTCGAGCCAGGCTTCCTTGAATATGTCGACGGCTCACCGCTGACCGTAGACCGCTCGACCCAACTGATCCAGCGCGGGGACAACATCTACAGCGTCAAGCGCCCGGCATCGTTCCCCGTCAATCTGACCGGGAACTGGGCGACGGACCAGAACCTCCTGGTTGCCCAGGTTGACCGGACGCTGCAAGACACCCTGGCCACCAGCGCTGGCGCCGGGATGATCGGCTATCGCGAGCGCACCGTAGCCGACCGCTTGAACGACACCGCCAATGTCAAGGACTACGGCGCTATCGCAGATGGGGCGTATCACCCGTTGTCAGAGCGGTTCGCTACGCTCGCCGAGGCGCAGGCGGTTTATCCGCACGCCACTGCGCTGACCGACAGTATCGACTGGGCGGCGTATCAGGCGGCAATCAACTCCGGGGCGCCGCATGTGCATGCGCCAGGCGGCCACTACGTCATGAATCGCGGAACTCTCGCTGAGCGGGATATTCGGTATACCGGCGATGGCTATGCTACCCGCGTGGATTTCAGCATGGCCGATGGCCCCGGTAGTTGCATGCTGACGCAGGGCGAGTTGGTGCAAATCGGCGATCTGTCCGTGAGCGTGGTTAAAGGCGCTCGCACGCTGACGTTTGCCACTGCACCAGACCTGGCCCCTGGCGACGTGGTCATCGTGTACAACCCCACCAACGGCTCTTGGCTGGCTGATCGCGATCCGTATCGCGCTGGCGAGATGTGGAAGGTCCATTCGGTAAGCGGCAGCACTGTCACGATCTACGGAAACAGTTCGTCGGTGTACCTGTTCTCCGAGGTAGACGTATACCGCATGCGCGGCGTGCGCGTGTCTGTCGATCAGATGCATTTTTCGCCATCGGACACATATGCTATTGCGCCGTTCAGGGCGGTTTTCGGTGATGGAGTTAAGGTTTCCAACTACTACGCTAGCGATGTCACGCGTTACACAGGGCTAGAAGTAGAACGATGCTTTGACGTTTCGATCAATGCGGTTTCAAGCCCGAACAGATCGCCGGCAGTCAATGACGAATATGGGATTACTATCTCGAACTGCCATAATTTCTCGGTGTACGGTGGTTATGCAGCGGCAACCAGGCATGCTGTCGCGCTCGGCGGAATGGACGCTGTGTGCTGCGTGCCCAACCGTAACGGACTGATTTACGGTATGCATATAGAGGGCATCGATATCGATTCGGATATTGGTGCGGGAGATATGCATGGCAACGCCGACAAAATCACATACGACAACTGCGAGTTTCGGAACGGGGTGATTCTTCAAGGACGAGACGCCACCGTCCGTAACAGCACTATCTATGGCGTTTCGAGCGTTTCGGGCGAAGCTCTATACGGGACCGAAGTGTATGGCGGGACGTATACAATCGAGAACAATCGTTTTATCAGTTACGGAAACGGTGCGTCTTTCGGCATCATCCATATTTCACCAGGGACGAGCCAGCGCGAAGCGCTACTGATCATCGCGAGAAACAACACATTCGAACTGCCGAATGCCACAGGATCGACAAAGGTGTTGTTCTTGCGCGGACGCAATAGTCCGCTCCCGTGCAGTGTTAACATCGACGGCATGCATGTCCACATGGCGCCTGTTGCGATGCAGTGTTTCCTTTTCGCAGACGACCAAGTTGCAGCAACTCTGAACAGTAACTATCTGATCATTGACGGCGTATATGGGCCTAGTGGTACGTACCTGCTGTATCCAACCTCGAAGAATGCCGCCATACCGACCAGGCAGATGCACCAGTCCGGCGCGGTGAACGTGACTACTACGGCGTCCGCTACGGTTGCAGCCCCAGCTCAGACCATTCGCTACCCATACTCCAAGATACCTAACGTTAGCGTGCAGGTTTCCAGTCAGTCGGGCGGTGATCAGAGCGCAATCGGGTCAATCACCCCTGTGGCGATTGCGTACAATGTGCAGCCGAACAGCATCAGGCCTGCAATCATGGCGCCCAGCGGATCGTTCGCGGCTGGAGGCTCCGCTCGTCTTCACTGGTCTGCTAGCCTAGATGATATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2aabbd323d724de6b11df053ea97f1b16b347d51e2bd14ec68303e4e086fcf73
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8039
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages of P. aeruginosa: insights into their role through their activity, abundance and persistence Kyrkou,I., Bartell,J.A., Lechuga,A., Lood,C., Lavigne,R., Molin,S. and Krogh Johansen,H. 2024-01-16 — GenBank