Protein

View in Explore
Genbank accession
AXF39159.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MDQTMINFKKFTSYTPDEDKSELVEAGVVFLRDENGNDWYECQKFFHENTIKIVYDSDNIVVSISNDVSTLWPVGASVAEIEILPEGVDINGNWMFDGKNVVERVRTADELKAMAESRRTELLNNARQQLVISQTKLLRGRILSEDEQSSLDAWLDYIDAVNALDFNTITDKASFNAIVWPTEPG
Physico‐chemical
properties
protein length:185 AA
molecular weight: 21016,19210 Da
isoelectric point:4,33371
aromaticity:0,09189
hydropathy:-0,35568

Domains

Domains [InterPro]
DC_0382
STR
1–135
DC_0382
IPR003458
RBD
41–184
IPR003458
AXF39159.1
1 185
Architecture
STR
RBD
STR 1-135 | RBD 136-184 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Punavirus P1
[NCBI] 		10678 Uroviricota > Caudoviricetes > Punavirus >
Host Enterobacteriaceae
[NCBI] 		543 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF39159.1 [NCBI]
Genbank nucleotide accession
MH422554.1 [NCBI]
CDS location
range 28195 -> 28752
strand -
CDS
ATGGATCAAACAATGATTAATTTTAAAAAGTTCACATCCTACACCCCAGATGAAGATAAGTCAGAGCTTGTTGAAGCTGGAGTTGTATTTTTACGTGATGAAAACGGTAATGACTGGTATGAATGTCAGAAATTTTTTCATGAGAACACGATAAAGATAGTTTATGACAGCGATAATATTGTTGTGAGTATTTCAAACGATGTTTCAACACTCTGGCCAGTGGGGGCATCTGTAGCAGAAATAGAAATCCTGCCTGAGGGAGTAGATATTAACGGGAACTGGATGTTTGACGGAAAAAATGTGGTTGAAAGAGTAAGAACCGCAGATGAGTTAAAAGCTATGGCGGAATCAAGACGCACTGAGCTACTTAACAACGCACGTCAACAACTCGTGATTAGCCAGACAAAATTACTACGCGGCAGAATATTATCTGAAGATGAACAGTCTTCTCTTGACGCCTGGCTGGACTATATTGATGCAGTTAATGCATTAGATTTCAACACAATAACAGATAAAGCCAGTTTCAATGCGATCGTCTGGCCTACTGAGCCAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
08c05afab7bb92749d2b8458564b605fe086c4757b3481811be263d3e360bba3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9518
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Experimental evidence of massive horizontal gene transfer in the gut microbiota of preterm infants Rudi,K., Ravi,A. and Hagboe,M. 2019-07-01 — GenBank