Protein

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UniProt accession
A0A8S5U8X9 [UniProt]
Protein name
YadA-like protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MNKTILTAAIFATVAGNAFAAGSIAVGQVEPNTLAPVANGYNSIVAGANSSANGSNVVVFGRDNTVSADDTTVIGGGNGTVAAGETTVIGYNNYVGAHKEQVMIGANSVVDNQGAIAIGTHTMTRGMDAVTIGNNASAPVQNSVAIGTNSQTYEPVGFGQMEINGVTHVFAGEAPNSSVSFGSKKSETYSHLDNYSRQLQNVAAGRIEADSLDAVNGSQLFATIDEINRNGLAITNNAQNIAKNAQNIAGNTNAIAANTKAIADNSKNIAGNAAAITNLGAVVNNQGKALANHEGRIATLESDNKALKNDVQNTQNQVNINTKDIADLKGNNAALEQNFNNQISNVMDEVAKTGAANAALSALHYVGYNADDKLSFAAGYGHYKNANAAALGAFYAPNEHVLFSVAGTFGADKMVNAGVSFRLGKGSEYETNHKGKIAQLEALVNQLVKEVEELKAGK
Physico‐chemical
properties
protein length:458 AA
molecular weight: 47163,43810 Da
isoelectric point:5,49931
aromaticity:0,05459
hydropathy:-0,18668

Domains

Domains [InterPro]
IPR011049
STR
7–95
IPR011049 IPR011049 Coil Coil IPR005594 Coil
IPR011049
STR
7–100
IPR011049 IPR011049 G3DSA:3.30.1300.30
IPR011049
STR
37–225
IPR011049 G3DSA:3.30.1300.30
IPR008635
RBD
198–242
IPR008635 IPR045584
A0A8S5U8X9
1 458
Architecture
STR
RBD
ATT
STR 7-252 | RBD 291-367 | ATT 368-425 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5U8X9
1 458
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0029
Central domain 11 364 355 0,7417
C-terminal 365 458 93 0,4152
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-364
C-terminal
365-458

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ctrJu12
[NCBI] 		2825278 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF90916.1 [NCBI]
Genbank nucleotide accession
BK016040 [NCBI]
CDS location
range 3246 -> 4622
strand -
CDS
ATGAATAAAACAATTTTAACAGCAGCAATTTTCGCAACGGTAGCAGGCAACGCATTCGCAGCAGGTAGTATCGCAGTAGGGCAAGTAGAGCCAAACACGTTGGCGCCTGTGGCTAATGGCTATAATTCCATTGTAGCTGGGGCTAATTCCAGCGCTAATGGTTCCAATGTGGTGGTATTTGGCCGAGATAATACTGTGAGTGCAGATGATACTACTGTTATTGGCGGCGGTAATGGTACTGTAGCGGCAGGAGAAACTACAGTTATCGGCTATAACAATTATGTAGGCGCTCATAAAGAGCAAGTTATGATCGGCGCCAATTCTGTAGTAGATAATCAAGGCGCCATTGCTATTGGTACACATACCATGACGAGAGGTATGGACGCAGTAACAATCGGCAATAACGCAAGCGCACCAGTACAAAATAGCGTAGCTATTGGCACAAACAGCCAAACATATGAGCCTGTAGGCTTTGGACAAATGGAGATAAACGGCGTTACTCACGTTTTCGCAGGTGAGGCGCCTAATTCTTCCGTATCTTTTGGCAGCAAAAAAAGCGAAACATACAGCCATTTAGACAACTACTCTCGCCAGTTGCAAAATGTGGCAGCTGGCAGAATTGAGGCTGACAGCCTCGACGCCGTGAATGGTTCCCAGCTATTCGCAACTATTGATGAGATTAACCGCAACGGCCTAGCAATCACTAATAACGCTCAAAATATTGCTAAAAATGCGCAAAATATCGCAGGTAATACAAACGCCATTGCAGCGAACACAAAAGCGATTGCTGATAATTCCAAAAATATTGCAGGCAACGCCGCAGCGATCACTAACTTGGGCGCAGTAGTCAATAATCAAGGCAAAGCACTAGCTAACCATGAGGGCCGTATTGCAACGCTGGAAAGCGACAATAAAGCACTCAAAAACGATGTGCAAAACACTCAAAATCAAGTAAATATCAATACCAAAGATATTGCAGATTTGAAAGGCAACAATGCAGCACTCGAGCAAAACTTTAACAATCAAATTTCCAATGTTATGGACGAGGTAGCAAAAACTGGCGCAGCTAATGCAGCACTCAGCGCTTTGCACTATGTAGGCTATAACGCAGATGATAAATTGAGCTTTGCTGCAGGTTACGGCCATTATAAAAATGCTAACGCAGCAGCTCTCGGCGCATTCTACGCACCTAACGAACATGTATTATTTAGCGTTGCAGGCACATTCGGCGCCGATAAAATGGTAAACGCTGGCGTATCTTTCAGACTAGGTAAAGGCAGCGAATACGAAACTAACCATAAAGGCAAAATCGCACAGCTCGAGGCACTTGTAAATCAATTAGTCAAAGAGGTTGAGGAATTGAAAGCAGGTAAATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0019867 outer membrane Cellular Component IEA:InterPro (UniProt)
GO:0015031 protein transport Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
41207d8e244fc18613664c50546f570b2b4972420d52efaba7c4128f7caacaef
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8736
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50