Protein

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Genbank accession
YP_004421741.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MTATTIRVQMAQRTDTAANWTAANPILLLGELGHESDTDKLKIGDGSTNWNSLTYLPIDGTWTGDTIAVAYGGTGQTTYTDGQLLIGNTTGNTLAKATLTAGTGISVTNGSGSITLAIDSDTAIANITTTATSGTLPTPDGSVTIADASTPTVAELLEYCVELEAKLEAALAALRTVGVIAT
Physico‐chemical
properties
protein length:182 AA
molecular weight: 18508,38020 Da
isoelectric point:4,12238
aromaticity:0,03846
hydropathy:0,10879

Domains

Domains [InterPro]
DC_0999
STR
1–180
DC_0999
SSF69349
STR
12–126
SSF69349 Coil
IPR041352
ATT
13–48
IPR041352
YP_004421741.1
1 182
Architecture
STR
ATT
STR
STR 1-12 | ATT 13-48 | STR 49-180 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBS3
[NCBI] 		753085 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CB0202
[NCBI] 		305430 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004421741.1 [NCBI]
Genbank nucleotide accession
NC_015465.1 [NCBI]
CDS location
range 18151 -> 18699
strand +
CDS
ATGACCGCAACAACCATCCGTGTGCAGATGGCGCAGCGGACTGATACCGCCGCCAACTGGACAGCAGCCAATCCGATCCTGTTGCTCGGTGAGCTTGGCCACGAGAGTGACACGGACAAGCTGAAGATCGGTGATGGCAGCACCAACTGGAACAGCCTCACCTACCTGCCGATTGATGGCACCTGGACTGGCGACACGATCGCTGTGGCCTATGGCGGCACCGGCCAGACCACCTACACCGATGGCCAGCTGCTGATCGGCAACACCACTGGCAACACACTGGCCAAGGCCACGCTCACCGCTGGCACCGGCATCAGCGTCACCAATGGCAGCGGCAGCATCACGCTGGCGATCGACTCCGACACCGCCATCGCAAACATCACAACCACCGCCACTAGCGGCACGCTGCCGACGCCTGATGGCTCGGTGACGATTGCGGACGCCAGCACACCAACTGTTGCAGAGCTGCTCGAATACTGCGTCGAGCTTGAAGCCAAACTGGAAGCGGCCCTAGCGGCACTGCGCACCGTTGGCGTGATTGCGACCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f28821bef380ec0c9ad20f3626a4df04eebab2e68a16357f75e3ca5323758b3c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7571
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50