Protein

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Genbank accession
YP_011771150.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MKIYVAVDEYNVLTGWSSSYEENLIETEIDENHPLIVSNDFFGNYKLIDGKLVKDTSIELLNLKDMLKVELDQQCSEAIISGFSYPLTDTETLHVSYSRNKQQYFEEIKSLFERKIVTRINWEFTTDDGATITKELNEIEFLTLYTFASLVKTAKMTKLKEKLYPLVDKQTNKEDLLSITWDSIPDEPLPEKPVIDLNGDGEISQEEFDALVKENKELKQKVEFNELALMDAINMLSSMITG
Physico‐chemical
properties
protein length:242 AA
molecular weight: 27876,28510 Da
isoelectric point:4,45711
aromaticity:0,09091
hydropathy:-0,36612

Domains

Domains [InterPro]
DC_0182
STR
1–242
DC_0182
IPR002048
RBD
194–218
IPR002048
IPR018247
Unmapped
196–208
IPR018247
YP_011771150.1
1 242
Architecture
STR
STR 1-242
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage vB_EfaM_A2
[NCBI] 		2767513 Uroviricota > Caudoviricetes > Herelleviridae > Schiekvirus > Schiekvirus A2
Host Enterococcus faecalis OG1RF
[NCBI] 		474186 Bacillota > Bacilli > Lactobacillales > Enterococcaceae > Enterococcus > Enterococcus faecalis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011771150.1 [NCBI]
Genbank nucleotide accession
NC_102781.1 [NCBI]
CDS location
range 92046 -> 92774
strand +
CDS
ATGAAAATATACGTAGCAGTTGACGAATATAACGTATTGACTGGATGGAGTAGTAGTTACGAAGAAAATCTAATTGAGACAGAGATTGACGAAAATCACCCACTTATTGTCTCTAATGATTTTTTTGGTAATTATAAACTCATAGACGGTAAATTAGTTAAAGATACATCTATTGAATTGTTAAATTTAAAAGACATGTTAAAGGTAGAATTAGACCAACAATGCTCAGAAGCTATTATTAGCGGTTTTAGCTACCCATTAACGGATACAGAAACACTTCACGTCTCTTATTCACGAAATAAACAACAATACTTTGAAGAGATTAAGTCTCTTTTCGAACGTAAAATTGTTACTCGTATTAACTGGGAGTTTACTACTGATGATGGAGCTACTATTACTAAAGAGCTAAATGAAATAGAATTTTTAACCTTGTACACTTTTGCTAGTTTGGTTAAAACAGCAAAAATGACTAAGCTTAAAGAAAAACTATATCCACTAGTTGATAAACAAACAAATAAAGAAGACCTGTTGAGTATTACATGGGATTCTATTCCTGATGAACCATTACCAGAAAAACCTGTTATTGATTTAAATGGTGATGGTGAAATAAGTCAAGAAGAGTTCGATGCTTTGGTTAAGGAAAACAAAGAACTAAAGCAAAAAGTAGAGTTTAACGAATTGGCTTTAATGGATGCAATTAACATGCTATCGAGCATGATTACAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f0e3d8e7d010d5f954082882116d7a9394cb0070db315dbd26c4fd7a5b653361
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9153
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterizing phage-host interactions in a simplified human intestinal 1 barrier model Buttimer,C.T.H., Nunez-Sanchez,M.A., Colom,J., Walsh,L., Bolocan,A., Pang,R., Gahan,C. and Hill,C. 2020-09-07 — GenBank