Protein

View in Explore
Genbank accession
WPK39159.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MNYRVKHYRYRLIDGGYLVKDLKKNTETSLVFTGTYVKSYVQDVGENLINILNNFSYHLPPVSAVTGQLWWKENTRQMYIFPGPNGLDSTNINNWVPITKFEEDAVWAHITNYNNPHLVDKYSVKLDKLENYPIFDISKNFADVLNASSARTNLGVFGKDVTYTKAEADSLFLKKTDKAANSNNLNGIPAAKFMKVAAPVANAAINVTPSDGLMSFRSGKSYLESRGISNGLSINNTIATNNSSATILELNNTTLSTSSVFIKLYNRGSLNTTPVLALQYRLSPNQLYIGNNQVFHLGYRPTPAQIGALPVNGKASDSAALDGRINSTLATPGTVVERDSSGAITGRLLRSTGNNTSDQFTRNSKIGFVRSNSNNTMRFTPAQALNEWAGYNTLIKKSKGWISWSGPTGSRLDSWNLTVSKLASGRYRVYLSVPAPDTNYVVVLGNADAMVWNNQLNITEQWVTTKTTTYFDVNCKITKADHIINYNPSGWTNRFGEDYFDAPFFSLVIYY
Physico‐chemical
properties
protein length:511 AA
molecular weight: 56764,11490 Da
isoelectric point:9,40937
aromaticity:0,11155
hydropathy:-0,34207

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Cassandra
[NCBI] 		3092175 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK39159.1 [NCBI]
Genbank nucleotide accession
OR805292.1 [NCBI]
CDS location
range 256754 -> 258289
strand -
CDS
ATGAATTACAGAGTAAAACATTATCGATATAGATTAATCGATGGCGGATATTTAGTCAAAGATTTAAAAAAAAATACAGAAACTTCATTAGTATTCACAGGAACTTATGTAAAATCATATGTACAAGATGTTGGTGAGAATTTAATTAATATACTAAATAATTTCTCATATCATCTTCCGCCGGTATCTGCCGTAACAGGGCAGTTATGGTGGAAAGAAAATACAAGGCAAATGTACATATTCCCTGGACCAAATGGATTAGATAGTACAAATATAAATAACTGGGTTCCTATTACTAAATTCGAAGAAGACGCAGTATGGGCTCATATTACTAACTATAATAACCCTCACTTAGTAGACAAATATTCAGTAAAACTAGATAAATTAGAAAATTACCCTATATTCGATATATCTAAAAATTTTGCAGACGTATTGAACGCAAGTTCTGCTAGAACAAATTTAGGTGTTTTCGGTAAGGATGTTACTTACACTAAAGCAGAAGCAGATTCTTTATTTCTAAAGAAAACAGATAAAGCAGCAAACTCGAATAATTTAAACGGAATACCTGCTGCAAAATTTATGAAGGTTGCTGCTCCTGTAGCAAATGCAGCCATCAATGTAACACCATCTGACGGATTAATGTCGTTTAGATCAGGAAAATCATACTTAGAATCCAGGGGTATTTCTAACGGTCTATCTATTAATAATACAATAGCTACTAACAATTCATCAGCTACTATATTAGAATTAAATAATACCACGCTTAGTACATCATCTGTTTTTATTAAACTGTATAATAGAGGCTCACTTAATACAACTCCTGTTCTAGCATTACAATATAGATTATCTCCAAATCAACTATACATTGGCAATAATCAAGTATTTCATTTAGGATATAGACCGACGCCTGCACAAATAGGGGCTCTTCCTGTTAACGGTAAAGCATCAGATTCTGCTGCATTAGACGGTAGAATAAACTCTACACTTGCTACTCCAGGCACTGTAGTAGAGCGAGATTCCTCAGGTGCCATCACCGGTAGATTGTTAAGATCTACGGGCAACAATACCAGTGATCAATTTACTAGAAATAGCAAAATAGGTTTTGTAAGAAGTAATTCAAACAATACTATGAGATTTACTCCGGCGCAAGCATTAAATGAATGGGCCGGATATAACACTTTAATAAAAAAATCAAAAGGATGGATATCTTGGTCCGGTCCTACCGGCAGTAGACTAGATTCCTGGAATTTAACAGTTAGTAAATTAGCATCTGGTCGCTATAGAGTATATCTATCTGTGCCTGCGCCAGATACAAATTATGTAGTTGTATTAGGAAACGCTGATGCAATGGTATGGAATAATCAACTAAATATAACTGAACAATGGGTAACAACAAAAACTACCACATATTTTGATGTTAACTGTAAAATAACAAAAGCAGATCACATAATAAATTACAATCCATCAGGTTGGACTAACAGATTCGGCGAAGATTATTTCGATGCACCGTTCTTCTCACTTGTAATATACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
43fd69e9523bdfb3f2c5a0a047a3d3d90107415be362b76dff6704681c6c1748
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6226
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage Paride can kill dormant, antibiotic-tolerant cells Maffei,E., Harms,A. and Humolli,D. — — GenBank