Protein

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Genbank accession
WGH49510.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MEFIVIQGDKTLNLNNRKPLCSVTKAEHRQSLLSEDVINITVESKTPLALQVGNYIEYENRRYTLNSAPKVKKEQGYYTYDLVFEGVQYLLRDKVYFNLDAQGFQNTADFPLTGEINIFLTTLITNINSISDFTWVLGEYPQNTETKTLTFNNENCLAVLQKICQEYDTEFEIKQDLERKSYTLNIKKIGETLNQTFEYGKGNGLYSLSRVNVNDNVITRLYVFGSTNNIKSGYRDYSQRLRLPISHGKEYIQDNAKVKLFGLKEGVKNFDDIKPTFKGIVSGVTNLENGSQEIEVSNMDFDLNETDSNGTKYLLNDTPAKLHINKGNLAGYEFELLKNGGYNHATKTFRVKQFTDERGQKFPEAGSVFSFSVGDEFTLLDIAMPEQYITNAENKLLEEGQKEYEKQSVNNLKYNLELDPLYLQQIGANTSIFFKIGDYIRVIDEPLKIDKTTRIVDITRDLLDEYNYKIGIADTYEISFVASLLTDIKDTKTVIKTQEQINRRNYLSGYRNQKEFEENVFDADGNFDPTKIRHQSIEAYMLSTGARSQQFALENISLNPNIEGNPARTFISGGKLVHFSLEDDIREWNILPYRRNDLLNQVYYVYAKCSRGNSMGVWHITTEQIRFDSRSDYYYFLCYLLYTPKDGKREAEAMYGNVFMHGGQITAGRIKSLNGQTYFDLDSGEIAGTIKFRSSTGTYEDVGNAITLLNNANANLGTMAWQNSVEKAMLGDTIVQGGYIKTELLNASAIVSNGGGATSAELNNAINSIIIGGRNLVLDSKKTITHSDYNFSYEFEDDFSKIQGQTITISIDIEVSDITSGVRIGFEPSFLFQDGSRMYLRCWKYLNLGESFKGRISKTYTIPNKPIQSMEQKGMYVQVQGRITKVSNPKFELGNKATDWTPNPLDIEVQFANLQQGIANMQTSLSDVKTKTDNFASIQGGLMMANLMSVGSNQANQNAFISGITDEGAMSVRFGAGSNYANKHNAPFRVLDNGKVYGSDMEITGGKIARFNISGNTLSGQGIADPNDYLEIKSSGSILSYKKSLSSGRESYALINNDDSILNGNKNNILRLWGRDVNNYTPYNALSIRADGQYATALNIESGDIRVGGEVGYTGELFLGGVWLTIRKGIITNYS
Physico‐chemical
properties
protein length:1135 AA
molecular weight: 127609,57530 Da
isoelectric point:5,39376
aromaticity:0,10485
hydropathy:-0,44987

Domains

Domains [InterPro]
DC_1026
ATT
1–192
DC_1026 DC_0650
IPR007119
Unmapped
135–260
IPR007119
WGH49510.1
1 1135
Architecture
ATT
STR
ATT 1-192 | STR 457-1057 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGH49510.1
1 1135
Domain Start End Length (AA) Confidence
N-terminal 1 809 809 0,9413
Central domain 810 1033 225 0,5281
C-terminal 1034 1135 101 0,5217
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-809
Central
810-1033
C-terminal
1034-1135

Taxonomy

  Name Taxonomy ID Lineage
Phage Riemerella phage vB_RanS_CRP2
[NCBI] 		3041205 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Riemerella anatipestifer
[NCBI] 		34085 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGH49510.1 [NCBI]
Genbank nucleotide accession
OQ067112 [NCBI]
CDS location
range 41294 -> 44701
strand +
CDS
ATGGAGTTTATAGTCATACAAGGAGATAAGACCCTTAACCTTAATAATAGAAAACCTTTATGTTCGGTTACCAAAGCCGAACATAGACAGTCTTTGTTATCAGAAGATGTAATAAATATTACTGTAGAAAGTAAAACTCCTCTTGCTTTGCAAGTGGGCAACTATATAGAATATGAGAACCGAAGATATACACTCAACTCTGCACCAAAGGTAAAAAAGGAGCAGGGGTATTATACCTATGATTTAGTTTTTGAGGGCGTACAGTATCTATTGAGAGATAAGGTGTATTTCAACTTGGACGCTCAAGGCTTCCAAAATACGGCGGATTTTCCTTTAACGGGAGAAATAAACATTTTCCTTACGACGCTAATCACAAATATCAATTCCATTTCAGATTTTACTTGGGTTTTGGGTGAATATCCACAAAATACGGAAACTAAAACGCTGACTTTTAATAATGAAAACTGCCTCGCTGTTTTACAAAAAATCTGTCAGGAATACGATACCGAGTTTGAAATCAAGCAGGATTTAGAGAGAAAATCTTACACGCTCAACATTAAGAAAATAGGCGAAACTTTAAACCAAACCTTTGAATATGGAAAAGGAAATGGGCTTTATTCTTTAAGTAGAGTAAATGTGAATGATAATGTGATTACCCGTCTTTATGTTTTCGGCTCAACGAATAATATTAAAAGCGGATACCGAGATTATTCACAGCGTTTGCGATTGCCTATTTCTCACGGAAAGGAATATATTCAGGACAATGCTAAGGTAAAATTGTTCGGCTTAAAAGAGGGCGTTAAAAATTTTGACGACATCAAACCTACTTTTAAGGGGATAGTATCAGGCGTTACCAATTTGGAAAACGGCTCGCAAGAGATAGAAGTTTCTAATATGGACTTTGACCTGAACGAAACTGACAGCAACGGAACAAAGTATTTATTAAACGATACTCCCGCGAAGCTCCATATAAACAAAGGAAATTTGGCAGGATATGAATTTGAGTTGCTTAAAAACGGAGGCTACAACCACGCCACTAAGACTTTTAGAGTAAAGCAATTTACAGACGAAAGAGGACAAAAGTTTCCAGAAGCAGGTTCCGTGTTTTCATTTTCGGTTGGAGATGAGTTCACATTGTTAGATATTGCAATGCCCGAACAGTACATTACAAATGCCGAAAACAAACTCCTTGAAGAGGGACAAAAGGAATACGAAAAACAATCGGTAAACAACCTTAAATATAATTTAGAGTTAGACCCTCTGTATCTGCAACAGATAGGGGCTAATACGTCTATTTTCTTTAAAATTGGGGATTATATCCGTGTGATAGATGAACCGCTTAAAATAGATAAAACGACACGCATAGTAGATATTACGAGGGACTTATTAGACGAATATAATTACAAAATAGGCATTGCGGACACTTACGAAATCAGCTTTGTAGCAAGTCTGCTTACCGATATTAAAGACACTAAAACGGTTATAAAAACGCAGGAACAAATTAACCGACGAAACTATTTGAGCGGCTACCGTAATCAAAAGGAGTTTGAAGAAAATGTTTTTGATGCAGACGGCAATTTTGACCCAACCAAAATTAGACATCAAAGTATTGAAGCTTATATGCTTTCAACGGGGGCAAGAAGCCAACAATTTGCATTAGAAAATATAAGTCTGAATCCTAACATAGAGGGAAATCCTGCAAGAACATTTATTAGCGGTGGGAAATTAGTTCATTTTTCCTTAGAAGACGATATTAGAGAGTGGAACATATTGCCATACAGACGTAATGACCTGTTAAATCAAGTTTACTATGTCTATGCAAAATGTTCAAGAGGAAATAGTATGGGGGTATGGCATATCACCACCGAGCAGATAAGGTTTGATAGTCGGTCAGATTATTATTATTTCTTGTGTTACTTACTCTACACACCAAAAGACGGTAAGCGAGAAGCAGAAGCAATGTACGGCAATGTGTTTATGCACGGAGGGCAAATAACGGCAGGGAGAATTAAATCGCTCAACGGACAAACCTACTTTGACTTGGATAGTGGGGAAATAGCAGGAACGATTAAGTTTAGAAGCTCAACAGGAACTTATGAAGATGTTGGTAATGCTATTACACTTCTCAATAATGCTAATGCTAATCTCGGCACAATGGCGTGGCAGAACTCGGTAGAAAAAGCGATGTTGGGCGATACCATAGTACAAGGAGGCTATATCAAAACAGAGCTATTAAACGCTTCGGCAATAGTGAGTAATGGCGGAGGAGCGACTTCGGCAGAATTAAATAATGCCATCAATAGTATCATTATCGGGGGTCGGAATTTAGTATTAGATTCTAAGAAAACGATTACCCATTCAGATTATAATTTTAGCTATGAGTTTGAAGACGATTTTTCTAAAATACAAGGGCAGACAATCACTATTTCAATAGATATAGAGGTTTCGGATATAACTTCTGGAGTTAGAATAGGTTTTGAACCATCGTTTTTATTTCAAGACGGAAGTAGAATGTATTTGAGATGTTGGAAATACTTGAACTTGGGAGAAAGTTTTAAAGGGCGTATTTCAAAAACATACACTATTCCCAACAAACCAATTCAATCAATGGAACAAAAAGGTATGTATGTACAGGTTCAGGGGAGAATAACAAAAGTATCAAATCCAAAATTTGAATTGGGTAACAAAGCAACGGATTGGACACCAAATCCGTTGGATATAGAGGTACAGTTTGCCAACCTTCAACAAGGAATAGCTAATATGCAAACCTCTTTGTCTGATGTGAAGACCAAGACCGATAACTTCGCATCTATCCAAGGCGGGTTGATGATGGCTAATTTAATGAGTGTAGGAAGCAACCAAGCCAATCAAAATGCTTTTATTAGTGGTATTACCGACGAGGGAGCAATGAGCGTGAGATTTGGAGCAGGTAGCAATTATGCCAATAAACATAATGCACCATTTAGGGTGCTGGATAATGGGAAAGTTTATGGCTCTGATATGGAAATTACAGGTGGTAAAATAGCAAGGTTCAATATTAGCGGAAATACACTTTCGGGGCAAGGAATAGCAGACCCAAACGACTATTTAGAAATAAAGTCATCTGGAAGCATACTTTCATATAAAAAAAGTCTTTCATCTGGGAGAGAAAGCTATGCTCTCATCAATAATGATGATAGTATTTTAAACGGAAATAAAAACAATATACTTCGGCTCTGGGGGCGTGATGTGAACAATTATACGCCCTACAACGCCCTATCTATAAGGGCTGACGGACAGTATGCTACTGCCTTAAATATAGAATCGGGAGATATTCGTGTGGGTGGAGAGGTAGGATATACAGGAGAATTATTTTTGGGGGGAGTATGGCTTACCATTAGAAAAGGTATAATAACAAATTATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0362fba1ed3d0a07ad2724c3436fbe4d22aefe99c2e8a84662d1e334d014d67d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2743
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequence of Riemerella anatipestifer phage vB_RanS_CRP2 Cheng,L., Chen,H., Jiang,N., Fu,Q., Liu,R., Huang,Y., Fu,G. and Liang,Q. 2012-06 — GenBank