Protein

View in Explore
Genbank accession
URA07225.1 [GenBank]
Protein name
tail assembly protein
RBP type
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MAQVVVAQRMWQRRDTAANWSAKNPILAAGEIGVQLGATSDETKFKIGDGATPWNSLSFFEGRLIEIGTGGGYIRWRYVGDADWINLVSLESLRGPAGANGAQGPQGLSAYQVAVANGFAGTQAEWLASLKGEKGDQGDQGPPGIPSQRRIQRITNTDTGSIVCDWNSYDEIRVTLTADTLVNMTGALDGQGCVLLLKQGGVGGHGVSFGSNVRFNNLIPIYNPTTTAGKSDRLGFVYDDDAGFYDVQAIVDGI
Physico‐chemical
properties
protein length:254 AA
molecular weight: 26974,74320 Da
isoelectric point:4,81838
aromaticity:0,08661
hydropathy:-0,20748

Domains

Domains [InterPro]
DC_1473
STR
1–251
DC_1473
SSF69349
STR
9–109
SSF69349
IPR041352
ATT
13–52
IPR041352
URA07225.1
1 254
Architecture
STR
ATT
STR
STR 1-12 | ATT 13-52 | STR 53-251 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Seregon
[NCBI] 		2939133 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URA07225.1 [NCBI]
Genbank nucleotide accession
ON189048 [NCBI]
CDS location
range 32413 -> 33177
strand +
CDS
ATGGCACAGGTAGTCGTTGCACAACGCATGTGGCAGCGCCGCGACACTGCGGCGAATTGGTCTGCCAAGAATCCGATCCTCGCGGCCGGCGAGATTGGCGTGCAGCTCGGCGCTACTTCGGACGAGACCAAGTTCAAGATCGGCGACGGCGCGACCCCGTGGAACTCGCTGTCGTTCTTCGAGGGCCGGCTCATCGAAATCGGCACGGGCGGCGGTTACATCCGCTGGCGCTACGTGGGCGACGCCGACTGGATCAATCTGGTCTCGCTCGAATCACTGCGCGGCCCGGCTGGTGCGAATGGCGCGCAAGGCCCGCAAGGGTTGAGTGCATATCAGGTCGCCGTCGCCAACGGGTTCGCCGGCACGCAGGCCGAATGGCTCGCATCGCTGAAAGGCGAGAAGGGCGATCAAGGCGACCAAGGCCCGCCCGGCATCCCGTCACAGCGCCGCATCCAACGCATCACGAATACCGACACCGGCTCCATCGTGTGCGACTGGAACTCCTACGACGAAATCCGCGTGACCTTGACCGCTGACACGCTCGTCAATATGACGGGTGCTCTCGACGGACAGGGTTGTGTGCTGTTGCTGAAGCAGGGCGGCGTCGGCGGGCACGGCGTTTCCTTCGGCAGCAACGTGCGCTTCAACAACCTCATCCCGATCTACAACCCGACAACGACTGCCGGCAAGTCCGACAGGCTCGGCTTCGTCTACGACGACGACGCGGGCTTCTACGACGTGCAGGCAATCGTGGATGGAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4438e19cd2326db032e944567e91924e9e9ff008c8bad206b5747c04234f33bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9116
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of novel Xanthomonas phages for the plant pathogens X. translucens and X. campestris Erdrich,S.H., Sharma,V., Schurr,U., Arsova,B. and Frunzke,J. 2022 — GenBank
Xanthomonas phages Erdrich,S.H., Sharma,V., Arsova,B., Frunzke,J. and Schurr,U. — — GenBank