Protein

View in Explore
Genbank accession
XTP78258.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVSNIEQATSFVGEIAFESTLKPLAGQTAAFVAEFGIDGDSVWWPGYPVAFDPPFRIIGEFGLSLSKSGGSIFPFEFDRGIDDKDALVQALNDAGYEGGGGGTPFDDSFDIVLSDGDEDVSQGAIDLTGLSVGESIVNLDVLLGKLIPPQPPAFPNGTLSISNVSGNDPRLAIGFTDNTASGLTAGTSVSRITASGVSTFTFNDIGPGKEGTLAALLNGAEAASRVLTGTDEGTYSGLVIADQKDYPADRPGFWKSMDVSLNLLAVPVGVNKIKLTHSAAGQTNEAVFIRDTLTAVPTVSAGSVVQEVAGALAYSSSVPHYGTGASLTVGMSYNNLAGETYYGGSDPVTISGSNSIIAAKSLSYGSIGFVTPFARNTTAAQAISAQSIAIDGTNVHTSGVIQGVARNVNGASATVTLSSTIILVKRGTATGKIDELSVPVTGMGSTPNGLNALRVGLGAGDTPAGTPQSWDQTAALATHEAACVAGIMGHNQNNYATGYLPQGPNLSVGRSGAQYVTLSFKRAARSTFRIAITGSYAGCWVKLPGVSTAQPNAPNGWWNGFQAYDGAGIPGEAGDPNAGCALGAVMNGTSGTFQITFGTESSTNATNNEILVRLKFVAGQTLTALSFTN
Physico‐chemical
properties
protein length:629 AA
molecular weight: 64181,58480 Da
isoelectric point:4,56783
aromaticity:0,07790
hydropathy:0,06375

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage RBC63
[NCBI] 		3411844 No lineage information
Host Caulobacter crescentus CB15
[NCBI] 		190650 Bacteria > Proteobacteria > Alphaproteobacteria > Caulobacterales > Caulobacteraceae > Caulobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTP78258.1 [NCBI]
Genbank nucleotide accession
PV231352.1 [NCBI]
CDS location
range 34805 -> 36694
strand +
CDS
ATGGTGTCGAACATCGAGCAGGCGACTTCGTTCGTCGGCGAGATCGCGTTCGAGTCCACGCTCAAGCCGCTGGCGGGCCAGACCGCCGCTTTCGTCGCCGAGTTCGGCATCGACGGCGACTCGGTCTGGTGGCCCGGCTACCCGGTCGCCTTTGATCCGCCGTTCCGGATCATCGGCGAGTTCGGGCTTAGCCTGTCCAAGAGCGGCGGCTCGATCTTCCCGTTCGAGTTCGACCGGGGCATCGACGACAAGGACGCCCTGGTCCAGGCCCTCAACGACGCGGGCTATGAGGGCGGAGGCGGCGGCACCCCGTTCGACGACAGCTTCGACATCGTCCTGAGCGACGGCGACGAGGATGTCTCGCAAGGGGCCATTGATCTGACGGGGCTGTCGGTCGGCGAGTCGATCGTCAACCTCGACGTCCTCCTGGGCAAGCTGATCCCGCCGCAGCCGCCGGCCTTCCCGAACGGCACGCTCTCGATCAGCAACGTCTCGGGCAACGACCCGCGACTGGCGATCGGGTTCACCGACAACACCGCCTCGGGCCTGACGGCGGGGACTTCGGTCTCCCGGATCACGGCCTCGGGGGTTTCGACCTTCACGTTCAACGACATCGGTCCGGGCAAGGAAGGCACGCTCGCCGCGCTCCTCAACGGCGCCGAGGCCGCCAGCCGGGTCCTGACGGGCACGGACGAGGGCACCTACTCGGGTCTGGTCATCGCCGACCAGAAGGACTACCCGGCCGATCGCCCCGGCTTCTGGAAGTCGATGGACGTCAGCCTGAACCTCCTGGCGGTCCCGGTCGGCGTCAACAAGATCAAGCTGACCCATTCGGCGGCGGGGCAGACCAACGAAGCGGTGTTCATCCGCGACACCCTGACGGCGGTCCCGACGGTCTCGGCCGGCAGCGTCGTCCAGGAAGTCGCCGGTGCCCTGGCCTACTCGTCGAGCGTCCCACACTACGGCACGGGCGCCTCGCTGACGGTGGGGATGTCCTACAACAACCTCGCGGGCGAGACCTACTATGGCGGGTCGGACCCGGTGACGATCTCGGGCTCCAACTCGATCATCGCCGCCAAGTCCCTGAGCTACGGCTCGATCGGCTTCGTCACGCCGTTCGCGCGTAACACCACCGCCGCCCAGGCGATCAGCGCTCAGTCGATCGCCATCGACGGGACCAACGTCCACACCTCGGGCGTCATCCAGGGCGTGGCGCGTAACGTCAACGGCGCATCCGCCACGGTCACCCTGTCGTCGACCATCATCCTGGTCAAGCGCGGGACCGCGACGGGCAAGATCGACGAGCTTTCGGTGCCGGTCACCGGCATGGGCTCGACCCCCAACGGCCTCAACGCCCTGCGCGTGGGCCTGGGGGCGGGCGACACGCCGGCGGGCACGCCCCAGTCCTGGGATCAGACGGCGGCTCTGGCGACCCATGAAGCGGCCTGCGTCGCCGGCATCATGGGGCACAACCAGAACAACTACGCCACCGGCTATCTGCCCCAGGGGCCGAACCTGTCGGTGGGGCGCTCGGGCGCCCAGTACGTCACCCTGTCGTTCAAGCGCGCGGCGCGCTCGACCTTCAGGATCGCCATCACCGGCTCCTACGCCGGCTGCTGGGTCAAGCTGCCGGGCGTCTCCACCGCCCAGCCCAACGCCCCGAACGGCTGGTGGAACGGTTTCCAGGCCTACGACGGCGCCGGTATTCCGGGCGAGGCCGGGGACCCCAACGCCGGCTGCGCCCTGGGCGCGGTCATGAACGGGACCTCCGGGACCTTCCAGATCACCTTCGGCACGGAGTCGTCGACCAACGCGACCAACAACGAAATCCTGGTCCGCCTGAAGTTCGTCGCCGGGCAGACGCTCACGGCGCTGAGCTTCACGAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0c07721e1aa70bdffc7a47425b86da7f89012bc9a09bbb33cb9ca3a6ec45fe2c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8178
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Dolichocephalovirinae Phages Are Present as Episomal Pseu-dolysogens Within a Wide Range of Soil Bacteria Mohammadi,T. and Ely,B. 2025-05-28 — GenBank