Protein

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Genbank accession
WNV48186.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MFGPGAKIETLTGVSAAASCNVTVLGAEFNGTSNGIIRASGTAAVTLKSTGARLRGSAAWWVAPSGTPTLNPKSDEIQLDVSDTKVVKAQGNTCYNTNAAVGTLGVAGPVVADASVWRLRTDLTKTS
Physico‐chemical
properties
protein length:127 AA
molecular weight: 12838,32640 Da
isoelectric point:9,13706
aromaticity:0,04724
hydropathy:0,06850

Domains

Domains [InterPro]
PS51257
STR
1–20
PS51257
DC_1863
RBD
1–120
DC_1863
WNV48186.1
1 127
Architecture
STR
RBD
STR 1-20 | RBD 21-120 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNV48186.1
1 127
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0072
Central domain 11 116 107 0,5750
C-terminal 117 127 10 0,9651
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-116
C-terminal
117-127

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage Quill_5.2
[NCBI] 		3075108 Uroviricota > Caudoviricetes > Autographivirales > Lullwatervirus > Lullwatervirus quill52
Host Caulobacter crescentus CB15
[NCBI] 		190650 Bacteria > Proteobacteria > Alphaproteobacteria > Caulobacterales > Caulobacteraceae > Caulobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV48186.1 [NCBI]
Genbank nucleotide accession
OR260090 [NCBI]
CDS location
range 42957 -> 43340
strand +
CDS
GTGTTCGGACCGGGCGCGAAAATCGAGACGCTGACGGGCGTTTCGGCGGCTGCTAGCTGCAACGTGACGGTTTTGGGCGCTGAGTTTAACGGTACCTCAAACGGCATCATCCGTGCGAGCGGAACGGCCGCCGTGACCCTTAAATCTACAGGGGCGCGGCTTCGTGGAAGTGCGGCGTGGTGGGTTGCCCCATCCGGCACCCCGACGCTCAACCCTAAGAGCGACGAAATTCAGCTCGACGTGAGCGACACCAAGGTCGTGAAGGCGCAGGGCAATACGTGCTACAACACCAACGCGGCTGTTGGAACGCTCGGCGTCGCGGGGCCTGTCGTCGCTGACGCCTCCGTCTGGAGGTTGAGGACGGACTTAACCAAGACCTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dca3e72a855f73fad33091c9f5c2eb92994d63879a99bd08e9d9269aef6fe1bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3212
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New Genera and Species of Caulobacter and Brevundimonas Bacteriophages Provide Insights into Phage Genome Evolution Ely,B., Hils,M., Clarke,A., Albert,M., Holness,N., Lenski,J. and Mohammadi,T. 2024 — GenBank