Protein

View in Explore
Genbank accession
QEG06975.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDLRFPMSLRPIVSKGYSQTRGSNIWRTEVQGGVPRQGRDTYFEPVPISVTLVVSSLGRQAFYSFLNNIDGGASSFIMPHDTGLGLEDHQVLITSDISDSTDDGKNWVITFTATAERTAIQEDTCLTKNLPDLYGCYGDCLGSFLKIYANYETTFPRIWSDEGPAGYPPINLLASALDSRIVYDGPQVYYINRNGNLVQSATNEWPLTFIDGVAVGRVPPEVGGLNLLKMSEDLSDPVWAKTRTTVTYGGTQDPTGGTGASKLVPTTTTGTHNVLQLITPEASTAYTYSVFVKANGYNNALVQIGVFASQVASNPVYVDLSTGVITSANDYSRCGIIAVGDGWFRVWVRVITNSSPTSINASVWASDAANNTSFPSDGVSAISVFGAQMEKSTNSSSYIKTEENLITRPTASAKVVMSGATSIDITYSDDSVVNVPSVDGYASIPQADSAWGSKYITRIDFNVDG
Physico‐chemical
properties
protein length:466 AA
molecular weight: 50096,16550 Da
isoelectric point:4,62848
aromaticity:0,09657
hydropathy:-0,12296

Domains

Domains [InterPro]
DC_0353
STR
49–466
DC_0353
NF048003
Unmapped
227–410
NF048003
QEG06975.1
1 466
Architecture
STR
STR 49-466
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Snoke
[NCBI] 		2580404 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEG06975.1 [NCBI]
Genbank nucleotide accession
MK931441.1 [NCBI]
CDS location
range 18651 -> 20051
strand +
CDS
ATGAGTGATTTGAGATTCCCTATGTCCCTTCGACCAATAGTGTCGAAGGGGTACTCCCAAACGCGAGGGAGTAATATCTGGCGTACAGAAGTGCAAGGTGGCGTACCGCGACAGGGGCGTGATACATACTTTGAGCCAGTGCCGATTAGCGTTACGCTCGTCGTATCGTCGCTCGGGCGACAGGCGTTCTATAGCTTCCTGAACAACATAGACGGCGGTGCGTCTTCATTTATCATGCCGCACGATACGGGTTTAGGTCTCGAAGACCACCAGGTACTTATTACGTCGGACATTAGCGACAGCACCGACGATGGTAAAAACTGGGTAATTACTTTCACAGCAACCGCGGAGCGGACTGCGATTCAGGAAGATACCTGCCTTACGAAGAATCTGCCAGATTTGTATGGTTGCTACGGGGATTGTCTGGGTAGTTTCCTGAAAATATACGCGAACTATGAGACTACGTTCCCGCGCATCTGGAGCGATGAAGGGCCTGCAGGATACCCGCCGATTAACCTTCTGGCGTCCGCCCTGGATAGCCGCATTGTGTACGACGGGCCGCAGGTTTATTACATCAACCGCAACGGCAATCTTGTGCAATCAGCCACTAATGAATGGCCTCTAACATTTATTGATGGTGTTGCCGTTGGGCGTGTGCCGCCGGAGGTTGGTGGTCTAAACCTACTAAAAATGTCAGAGGACTTATCGGATCCCGTATGGGCGAAAACAAGGACTACTGTTACCTACGGTGGAACGCAAGACCCTACCGGCGGAACGGGCGCATCCAAACTAGTCCCAACAACAACCACTGGTACTCATAACGTTTTACAATTGATAACCCCGGAAGCATCTACGGCATACACCTATTCTGTTTTTGTGAAAGCAAATGGGTACAATAATGCTCTTGTTCAGATCGGAGTATTTGCTAGTCAGGTGGCAAGTAATCCTGTTTATGTAGACCTATCTACGGGGGTGATAACATCAGCTAATGACTATTCAAGATGCGGTATAATAGCAGTAGGTGATGGCTGGTTTAGAGTATGGGTGCGAGTTATTACTAATTCCTCCCCGACAAGTATAAACGCGTCTGTGTGGGCCTCTGACGCTGCTAACAACACGTCTTTCCCAAGTGATGGTGTTAGTGCTATATCAGTTTTTGGTGCCCAAATGGAGAAATCTACTAATTCATCGTCGTATATTAAAACCGAAGAAAATTTAATTACACGCCCTACAGCCTCGGCAAAAGTAGTAATGAGCGGAGCAACAAGCATCGACATTACATATTCCGACGACTCTGTGGTAAACGTTCCGTCTGTTGACGGTTATGCCTCCATACCCCAAGCGGATTCGGCGTGGGGTAGTAAATACATCACTCGTATCGACTTTAATGTGGACGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
89bcc87e5f0bb4fa1513dd639c9377d3b491c94b6699a79120b18c85e86818ad
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8808
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Escherichia coli Siphophage Snoke Corban,J.E., Gramer,J., Moreland,R., Liu,M. and Ramsey,J. 2019 31582444 GenBank