Protein

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Genbank accession
QQV87771.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATTPTSLPIPSEDPRDLKFNAGKFDEVMTSDAHYYVDRFGVKRWTIAGFQYTAEEAIRAYGYITMDSFEDGATLTLPNQVLRYEATGEYYRWDGAFPKAVAAGSTPASTGGVGLGAWISVGDAAFRQEANKKFKYSVKLSDYSTLQEAVTAAVDGLLIDSDYNFTDGETVDFGGKVLTIECKAKFIGDGVLNWNNLGSGSKVISPHMHTKTTPYTVYRFDDNGNWVTNPTTILASVAQRLDKGYKPNVNDHDIWAFLPDNVKNQVAGATLRVNSANNIIFTHPEATMGGYLFTLCNHILVESPRNFIAWESGITFENHHTTAWGTGNKVVGGEIKYGSGSAVLFIRNDGGDDHDGGVQDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYSLAEYPWFQLPTKHIIRNIITRDCMGIGAWWDGQQNIIDNIITYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVMIHAYTTQGYAVYAPSSEISNVACAGSGTKLILCTYVGDIQGGNINVQHGDNTMTMAMRPAMGGTINPSLVLTADCQVASPGNEASIVKLSAIQDGTRVAEMQLNRLGFKHMSIPVAASQLPESALEFNSSIGFFFGTDGALRILAKKPDGAFVTYSM
Physico‐chemical
properties
protein length:666 AA
molecular weight: 72567,32170 Da
isoelectric point:5,15884
aromaticity:0,10060
hydropathy:-0,24129

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
62–127
G3DSA:2.10.10.80 IPR012332
G3DSA:2.10.10.80
ATT
62–125
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
64–123
IPR040775 IPR011050
IPR015331
RBD
129–663
IPR015331
QQV87771.1
1 666
Architecture
ATT
STR
ATT 62-127 | STR 128-666
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQV87771.1
1 666
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9893
Central domain 145 564 421 0,9789
C-terminal 565 666 101 0,9156
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-564
C-terminal
565-666

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SpuS_NX263
[NCBI] 		2801497 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella pullorum
[NCBI] 		605 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQV87771.1 [NCBI]
Genbank nucleotide accession
MW427215.1 [NCBI]
CDS location
range 40712 -> 42712
strand +
CDS
ATGGCTACCACACCGACTAGCTTACCAATCCCGTCAGAAGACCCGCGCGACCTGAAGTTTAACGCTGGTAAATTTGATGAAGTCATGACATCTGATGCACATTACTATGTGGACAGATTTGGCGTAAAACGCTGGACTATTGCTGGATTCCAGTACACTGCGGAAGAGGCCATTCGTGCTTATGGATATATCACAATGGATAGCTTTGAAGATGGCGCGACGTTGACGCTACCAAATCAGGTGCTACGTTACGAGGCAACCGGAGAATATTACCGATGGGATGGTGCATTTCCTAAGGCTGTAGCTGCTGGTTCAACTCCTGCATCAACTGGTGGCGTTGGTTTAGGCGCGTGGATTAGTGTTGGTGACGCAGCATTTAGACAGGAAGCCAACAAAAAATTCAAATATTCAGTAAAATTATCAGATTATTCTACCTTGCAGGAAGCAGTTACTGCCGCAGTAGATGGACTGCTTATTGATAGCGATTATAACTTTACTGACGGAGAAACTGTTGATTTTGGTGGGAAGGTTTTAACCATTGAATGCAAAGCGAAGTTTATTGGCGATGGCGTCCTTAACTGGAATAACTTGGGTAGTGGATCCAAAGTTATTTCCCCTCATATGCATACTAAGACAACTCCTTATACTGTATACCGTTTTGATGATAATGGAAACTGGGTAACAAACCCTACTACAATATTGGCATCCGTTGCACAGAGACTTGATAAAGGTTACAAGCCAAATGTTAATGATCATGACATTTGGGCATTTTTACCTGACAATGTTAAGAATCAGGTAGCCGGGGCAACATTACGAGTTAACTCTGCTAATAACATTATTTTTACCCATCCTGAAGCTACTATGGGAGGGTATTTATTTACTCTCTGCAACCATATTTTAGTTGAATCCCCTCGTAACTTTATTGCATGGGAATCAGGTATTACTTTTGAGAACCATCACACTACAGCATGGGGCACTGGCAATAAGGTAGTGGGTGGAGAGATTAAATATGGTTCTGGTTCTGCTGTGCTGTTTATCCGAAATGATGGCGGTGACGATCATGATGGCGGGGTTCAGGATCTGATATCATATCGTGTAGGTGAAAGTGGTGTAAAAACTTATCAAAATGAAATAGGTGGACGTTCTGCAAGAAACTATCGGCTTGTATTTGATAACATAACCACGATTCAGTGTTACTACGACGGAATTGATGTTAATGCTGATACCGGCTCACCGACTGAGCGAGTGGATGATTACAGTTTAGCTGAGTACCCGTGGTTCCAGTTACCCACTAAGCACATCATCCGTAACATCATTACGCGTGATTGCATGGGTATTGGTGCGTGGTGGGATGGTCAGCAGAACATTATTGATAATATTATTACCTATGAGGCTCATAAAGAGGGTATTTTTGATAGAGGTACTAACAATGATATTACTAATGTAACAGTTATAGGTGCAAACAAAGATTTAACTAACCTAAACCAGCTTACATGTGAAGGTGGTAGCAGATTGCGCGGAGTGATGATTCACGCATACACCACTCAGGGGTATGCTGTTTATGCGCCATCATCTGAAATCAGTAATGTAGCCTGTGCCGGTTCAGGCACTAAACTTATACTTTGTACGTATGTTGGTGACATTCAGGGTGGAAACATAAACGTACAGCATGGTGACAACACTATGACCATGGCAATGCGACCTGCGATGGGTGGTACTATTAATCCTTCGCTGGTCCTGACTGCTGACTGTCAGGTGGCTTCTCCTGGGAATGAGGCAAGTATCGTCAAACTTTCTGCTATCCAGGATGGTACAAGGGTAGCTGAAATGCAGTTAAACCGTCTTGGTTTCAAACATATGAGCATTCCTGTTGCGGCATCTCAGTTGCCTGAAAGCGCATTGGAATTTAATTCTTCTATAGGTTTTTTCTTCGGAACTGATGGCGCATTGCGAATTCTTGCCAAAAAACCTGATGGCGCATTTGTGACATACAGTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
31ca41f5576bc955fc0db76ec6e503eec449abc72367ce44f5693257a45b47ef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7213
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome analysis of a novel bacteriophage vB_SpuS_NX263 that infects Salmonella enterica serovar pullorum Zhu,C. 2023-07-31 — GenBank