Protein

Genbank accession
UMO77179.1 [GenBank]
Protein name
pectate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYLEGTCTTGGVATPGVKVYAFRTGQWGAPASGISDFEGKWRVEGLVDDVLYDVAFVHPDGQWEGKMSSRRMPIFDPFADPYWEDTTLLVHFDDISGQVPTNERGVTGFRIGGTGALIADTAPTPKFGTGALNLNNGASAAGFWFGSTNGTGAVGSPVYISTTDNFTVEGWFYCRSGVATNTYRDICILGSTDKGIVINGSSQIVYYDGGIKIQGPSMTDLYDKWVWLVVQRENGVTGMWLDGNRIGTFGDTAEKNSFRLGSNTGNAEQFFGGFDEWRHTRAARYPGSPATINVPTAPFTPGNPIRSDSFTVDRLWNYEQTIGSGTWSISAGRLNVNHPAGDTFFIRRDFASQNLFCEAEIFQAQDSGFVWRYIDTNNFYIMSLMDDQGPLEPNTLKMYKRIGGTYTQIGSTTPITLTRGTANKVRMEMTGSTITVLINGTPVGSFTDTSIAVSGRMGFKAAAGSGYNGQLIVDNFKWDTLL
Physico‐chemical
properties
protein length:483 AA
molecular weight: 52554,01170 Da
isoelectric point:5,02146
aromaticity:0,12422
hydropathy:-0,23416

Domains

Domains [InterPro]
IPR013320
136–279
IPR013320 G3DSA:2.60.120.560
IPR010496
325–454
IPR010496
UMO77179.1
1 483
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas maltophilia phage vB_SmaM_Ps15
[NCBI] 		3071007 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UMO77179.1 [NCBI]
Genbank nucleotide accession
OL702939 [NCBI]
CDS location
range 16884 -> 18335
strand +
CDS
ATGGCATATCTAGAAGGCACATGCACAACAGGTGGCGTCGCCACCCCAGGAGTCAAGGTTTACGCATTCCGCACCGGACAATGGGGCGCGCCTGCATCAGGCATTAGCGACTTTGAAGGCAAGTGGCGTGTTGAAGGCTTGGTAGATGACGTTCTGTATGACGTCGCTTTCGTGCATCCGGACGGGCAATGGGAAGGAAAGATGTCAAGCCGACGCATGCCTATCTTTGATCCGTTTGCCGATCCATACTGGGAAGACACAACTCTACTTGTTCACTTCGACGACATCAGCGGGCAGGTTCCAACAAACGAGCGTGGTGTCACAGGATTCCGAATTGGTGGAACCGGGGCGTTGATCGCAGACACTGCACCGACTCCCAAGTTTGGTACAGGTGCCTTGAACCTGAACAATGGCGCCAGCGCCGCTGGATTCTGGTTTGGATCAACAAACGGCACGGGCGCCGTTGGCAGTCCGGTATACATTTCAACTACAGACAATTTCACTGTAGAGGGGTGGTTCTATTGCCGAAGCGGTGTCGCAACCAATACCTACCGAGACATTTGCATCTTGGGTTCAACTGACAAAGGTATCGTCATCAACGGCAGTAGCCAGATCGTCTATTACGACGGCGGTATCAAGATCCAAGGCCCAAGCATGACTGATCTATACGATAAATGGGTATGGCTTGTCGTCCAAAGGGAAAACGGCGTAACTGGTATGTGGTTGGACGGAAATAGGATCGGCACCTTCGGGGATACAGCCGAGAAGAATTCTTTCCGGTTGGGATCGAACACTGGCAATGCTGAGCAATTCTTTGGCGGTTTTGACGAATGGCGCCACACAAGAGCAGCCAGATATCCAGGCTCACCAGCGACCATCAATGTTCCAACTGCACCTTTCACTCCGGGAAACCCGATCCGGTCAGACAGTTTCACGGTAGATAGACTCTGGAACTACGAACAGACTATCGGCTCAGGTACTTGGTCGATCTCAGCCGGGCGTCTTAACGTAAACCACCCGGCTGGCGATACGTTCTTCATCAGGCGTGACTTCGCCTCGCAGAACCTTTTCTGCGAGGCTGAGATCTTCCAAGCTCAAGACTCAGGATTTGTTTGGCGGTACATTGACACAAACAACTTTTACATCATGTCCCTGATGGATGATCAGGGACCGTTGGAACCTAATACGCTGAAGATGTATAAGCGAATTGGTGGCACATACACACAGATCGGATCCACAACGCCAATCACCTTGACTCGCGGAACAGCCAACAAAGTGCGGATGGAGATGACGGGTTCTACTATCACTGTTCTGATCAACGGTACGCCAGTCGGATCATTCACTGATACATCAATCGCAGTCTCTGGTCGAATGGGCTTCAAGGCTGCTGCAGGTTCAGGCTATAACGGGCAGCTGATCGTTGATAACTTCAAGTGGGACACACTCCTATGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4c72dd5955d01684e211842c2a5082973c37dd6970029857ce452cf64ee6fedf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8421
Evidence 0,8421
Download PDB

Literature

Title Authors Date PMID Source
Characterization of bacteriophage vB_SmaM_Ps15 infective to Stenotrophomonas maltophila clinical ocular isolates Damnjanovic,D., Vazquez-Campos,X., Elliott,L., Willcox,M. and Bridge,W.J. — — GenBank