Protein

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Genbank accession
WNL51047.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MSDINISNLPVITQATGDDMIIINDANSITSIINWDRLTASISKLSGQISFDAGSETLPSIIFDNDVNSGFYQPDSDKLGISTGGVARIFIDSNGSVGINNTNPGDFNSGANNLVIGSTTEQDTGITLVTSATGENIINFADGTGLNAAVAQLIYDHDNNRMTCSTLGTEVYRITNEQDIIIGAETDDEDSRLTVAGGSVTIEDGSDLKPALNFRADLNTGITRPADDNLAVVTGGTQRLVVDETGRLGIGIADPLADIHVNKADATLIVTDSDAAGTPEFKVVAADGNLEVRVDDNAAAADSRMSLYVDGSELVRLVDSGEVIVPNKVVFNEAADDVTDPYARVGLGIDGEILLEADPSNLYADSGVRINIDGSDAFFLSADGDVNIIANGKIYWGTDTNTWIDHPQEDTIEIVTGGNEAVVAEPDGSVRFGTLGKIDQTGQDFLFGSTTAYVVGGHNHSFQLSGNAGNYGTHVAMFGPGAGGQHITFLKSAGDGTTPSIVSDDDELGSLRFAADNGLDYHSIGATVSAKVDGVVSATSTPASLIISTTPANSVAPTERVRISHSGAIGLGGENYGGVGQLIISNGTGAGPTWQDLPLYDISTLPDLP
Physico‐chemical
properties
protein length:609 AA
molecular weight: 63208,45420 Da
isoelectric point:4,05003
aromaticity:0,05583
hydropathy:-0,07570

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNL51047.1
1 609
Domain Start End Length (AA) Confidence
N-terminal 1 108 108 0,9351
Central domain 109 307 200 0,1018
C-terminal 308 609 301 0,8924
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-108
Central
109-307
C-terminal
308-609

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CREM2
[NCBI] 		3075959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNL51047.1 [NCBI]
Genbank nucleotide accession
OR473000.1 [NCBI]
CDS location
range 94985 -> 96814
strand +
CDS
ATGTCTGATATCAATATCAGCAATCTACCAGTTATTACGCAGGCCACCGGTGATGACATGATCATCATCAACGACGCCAATTCGATTACCTCTATTATTAACTGGGATAGACTCACCGCCAGTATTTCCAAACTCAGTGGTCAAATTTCCTTTGATGCTGGTTCGGAAACCTTACCGTCTATCATTTTTGATAACGATGTCAACTCTGGTTTCTATCAACCGGATAGTGACAAGCTTGGTATTTCCACTGGTGGTGTTGCTCGTATCTTTATTGACTCCAACGGTTCTGTTGGTATCAACAATACAAACCCTGGAGACTTCAACTCTGGTGCAAATAACCTCGTTATCGGTAGTACCACAGAACAAGATACTGGTATAACTCTGGTTACCTCTGCCACTGGCGAGAACATCATTAACTTTGCAGACGGTACTGGTCTGAACGCTGCGGTTGCTCAGTTAATCTACGACCACGATAACAACCGTATGACTTGCAGTACCCTCGGTACTGAAGTATATCGTATTACTAACGAACAGGATATTATTATTGGTGCAGAGACTGACGACGAAGATAGTCGTCTTACTGTTGCTGGTGGTTCTGTAACCATCGAAGACGGTAGCGATCTCAAGCCAGCTCTTAACTTCCGTGCAGACCTCAACACAGGTATTACTCGTCCTGCCGACGATAACCTGGCAGTTGTTACTGGTGGAACACAACGTCTTGTAGTTGACGAAACTGGACGTCTCGGTATTGGTATTGCTGACCCCCTTGCTGACATTCACGTCAATAAGGCAGACGCTACTCTTATTGTCACTGACTCAGACGCAGCAGGAACACCTGAGTTTAAAGTTGTTGCTGCTGACGGAAACCTCGAAGTTCGTGTTGACGACAACGCTGCTGCAGCAGACTCACGTATGTCTCTGTATGTTGACGGTAGTGAGTTGGTTCGTCTGGTAGACAGCGGTGAAGTTATTGTCCCCAATAAGGTTGTCTTCAACGAAGCAGCAGACGACGTTACCGATCCCTATGCCCGTGTTGGTCTTGGTATCGACGGAGAGATCCTGCTGGAAGCAGACCCCTCCAACCTTTACGCCGACTCTGGTGTTCGTATCAATATTGATGGATCTGACGCTTTCTTCCTGTCTGCAGACGGTGACGTCAATATCATTGCCAACGGTAAGATCTACTGGGGAACCGACACCAACACTTGGATCGATCACCCCCAAGAAGACACTATCGAGATTGTCACGGGTGGCAACGAAGCAGTAGTTGCAGAACCCGACGGTTCTGTTCGCTTCGGAACTCTGGGTAAGATTGACCAGACCGGTCAAGACTTCCTCTTCGGTTCAACAACTGCCTATGTTGTTGGTGGACACAACCACTCCTTCCAACTTTCAGGCAACGCTGGTAACTACGGTACCCACGTTGCTATGTTCGGACCCGGCGCAGGTGGTCAGCACATCACTTTCCTGAAGTCTGCCGGTGATGGCACAACCCCTTCTATCGTTTCTGACGATGACGAGTTGGGTTCACTTAGGTTTGCTGCAGACAACGGTTTAGATTATCACTCTATTGGTGCTACGGTTTCTGCCAAAGTTGACGGTGTTGTAAGTGCAACATCAACTCCTGCTTCACTTATTATCTCAACAACTCCAGCGAACTCGGTTGCCCCAACTGAGCGTGTTCGTATCTCACACTCTGGTGCTATTGGTTTGGGTGGCGAGAACTACGGTGGTGTTGGTCAACTTATTATCTCTAACGGTACCGGTGCTGGACCCACGTGGCAAGACCTCCCACTGTATGATATTTCAACTCTCCCTGACCTCCCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
34f4eb0b72a964723bf7c4e9052237ebaae99a54914563b4344cd53d7b97ef39
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7446
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a new cyanomyovirus promps the establishment of a new T4-like cyanophage cluster that is prevalent in the estuarine environment Liu,Y., Zheng,H., Meng,X. and Xu,Y. 2023-11-09 — GenBank