Protein

Genbank accession

CCI88555.1 [GenBank]

Protein name

phage tail fibers

RBP type

Evidence GenBank

Probability 1,00

Protein sequence

MISNNAPAKMVLNSIMTGYTLVYIQHSIYTDYDVIGRTFWLKLGDTTDRRDFTGIDTFFALINNLVPNTTYRVQGAFYDSIIDSELLNAQIGINLSNETNFKTKASPVITSARSESESVDVGTGAPVVVVETTGEADFCTIELKSTSTTDAPWVKYYIGALGTTIKFGGVPIGDYKIRISGQVTMPDGVTTDSSGYYELPDTLTVAYNFVPPTAPSDITFKAARIADGKERYDVRVEWDWERGNGSNVREFLVTYIDSAEYARTGWSKAQKINVGAAKAATIVSFPWKVEHTFKVSSIAWGPNEQSITESAPSTLILDEDTVLDNSFINETGIELNYAYIKGSLNDNGTWRQTFLVDAATGAISLGLLDDEGKAPISFDPLNKVVNVDGSVITKTINAASFVMTNLTGQDNPAIYTQGKSWGDNNAGIWMGMDNTIAKPKLDIGNATQWIRYDGDTLRISSGVVIGTPTGDVDIGTGLQGKQTVFVYKLGTTPPAKPTETDYPPTGWEIVPPNRTDMTQNIYTTTGTLDPVTNKLLTGTSWSNVVQWSGTEGTIGTRGSGLYTVAIDDLTAWNDSEANAFFQNNFNDAPVKYDVLTEYKTGSPQTAFTKQWSGTAWVLPAMVLHGDMVVDGTITADKIVANYAFLAQIGVDVIYNKAAALSDNPEAVYTMKIDLATGYIHIR

Physico‐chemical properties

protein length:	682 AA
molecular weight:	74174,10100 Da
isoelectric point:	4,56937
aromaticity:	0,10117
hydropathy:	-0,17185

Domains

Domains [InterPro]

IPR057550
10–97

IPR057550 IPR057551 IPR057552 IPR057549

CCI88555.1

1 682

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Domains [InterPro]

InterPro ID	Start	End	Source	Name
IPR057550	10	97	InterPro	Straight fiber protein PB4, first Fn3-like domain
IPR057551	103	196	InterPro	Straight fiber protein PB4, second Fn3-like domain
IPR057552	211	335	InterPro	Straight fiber protein PB4, third Fn3-like domain
IPR057549	350	661	InterPro	Straight fiber protein PB4, spike domain

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Yersinia phage phiR2-01 [NCBI]	1206557	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Yersinia enterocolitica [NCBI]	630	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Yersinia

Coding sequence (CDS)

Genbank protein accession

CCI88555.1 [NCBI]

Genbank nucleotide accession

HE956708.2 [NCBI]

CDS location

range 88749 -> 90797
strand -

CDS

ATGATTTCAAACAATGCACCAGCCAAGATGGTTCTAAATAGTATTATGACTGGGTATACGCTTGTGTATATCCAGCATTCTATTTACACAGACTACGATGTTATAGGTCGTACATTCTGGCTAAAATTAGGAGATACTACCGATAGACGTGACTTTACCGGAATCGATACATTCTTCGCTCTAATTAATAACCTTGTCCCTAATACAACGTATAGGGTACAGGGTGCGTTCTACGACTCTATTATAGATTCTGAGTTATTGAATGCACAGATTGGTATTAACCTTTCTAATGAAACCAACTTCAAAACCAAGGCTTCCCCTGTTATAACTTCTGCTAGATCTGAGTCTGAATCTGTAGATGTTGGTACAGGTGCACCAGTAGTCGTTGTGGAAACTACTGGAGAAGCAGATTTCTGCACTATTGAGCTGAAAAGTACTTCTACTACGGATGCTCCTTGGGTTAAGTATTATATAGGCGCCCTGGGGACTACTATTAAATTTGGTGGTGTACCTATTGGTGATTACAAAATCAGAATCTCTGGCCAAGTAACTATGCCAGATGGTGTAACTACGGATTCTTCTGGATATTATGAACTACCAGACACTCTTACTGTTGCTTACAATTTTGTACCCCCTACTGCTCCTTCTGACATTACTTTTAAAGCTGCTAGAATAGCTGATGGTAAAGAAAGATATGATGTTCGTGTGGAGTGGGACTGGGAACGCGGAAATGGTTCTAACGTTCGTGAATTCTTAGTTACTTATATAGATTCTGCTGAATATGCTAGAACTGGATGGTCTAAGGCTCAGAAGATAAACGTTGGTGCTGCTAAAGCCGCAACCATTGTGTCATTCCCGTGGAAAGTGGAGCATACCTTCAAGGTATCCTCTATTGCCTGGGGACCAAATGAACAAAGTATCACAGAATCAGCTCCTTCTACACTCATTCTAGACGAGGATACTGTACTTGATAATAGCTTTATTAACGAAACAGGTATTGAATTAAACTACGCGTATATAAAAGGTAGCTTAAATGATAATGGTACCTGGAGACAAACATTCTTAGTAGATGCTGCTACTGGTGCTATTAGTCTCGGACTTTTAGACGATGAAGGTAAGGCCCCAATCTCCTTCGACCCACTAAACAAAGTTGTTAACGTTGATGGTAGTGTTATCACTAAAACTATTAACGCTGCTAGCTTTGTAATGACTAACTTGACTGGGCAAGATAATCCAGCGATTTATACCCAAGGTAAGTCTTGGGGAGATAATAATGCAGGTATTTGGATGGGAATGGATAACACTATTGCCAAACCAAAACTTGATATTGGTAACGCTACCCAGTGGATTCGTTATGATGGGGATACTCTGAGAATATCTAGTGGAGTTGTTATTGGAACACCTACTGGTGATGTTGATATTGGAACTGGTCTACAAGGTAAACAAACAGTATTTGTTTACAAACTAGGTACTACTCCACCAGCGAAGCCTACTGAAACTGATTATCCTCCTACTGGTTGGGAAATCGTACCACCAAATCGTACAGATATGACTCAGAATATCTATACCACTACAGGTACTTTAGATCCTGTTACCAATAAACTTTTAACTGGTACTAGTTGGTCTAACGTGGTTCAGTGGAGTGGTACAGAAGGTACAATAGGTACTCGTGGATCTGGTCTATATACTGTTGCTATTGATGATTTAACAGCATGGAATGACTCAGAAGCTAATGCATTCTTCCAGAACAACTTTAATGATGCTCCTGTTAAATATGACGTGTTAACAGAATATAAAACTGGCTCACCACAAACAGCATTTACTAAACAATGGTCTGGAACAGCCTGGGTTCTCCCAGCTATGGTGCTTCATGGAGATATGGTAGTAGATGGTACTATTACCGCAGATAAGATTGTAGCCAACTACGCATTCCTTGCACAAATCGGGGTTGACGTTATTTATAATAAAGCTGCTGCACTCTCTGATAATCCGGAGGCAGTCTACACGATGAAGATAGACCTAGCAACTGGGTATATCCATATAAGGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID

52c81826e71720a2ada03e6be7276c8a93460748be4786951f8c0733c5e24524

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7814

Evidence 0,7814

Download PDB

Literature

Title	Authors	Date	PMID	Source
Genomic, physiological and proteomic characterization of the T5-like bacteriophage phiR2-01 infecting Yersinia enterocolitia	Pajunen,M.I., Happonen,L.J., Jun,J.W., Malmstrom,J., Nawaz,A., Mattinen,L. and Skurnik,M.	2021-10-28	—	GenBank