Protein

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Genbank accession
CCI88555.1 [GenBank]
Protein name
phage tail fibers
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MISNNAPAKMVLNSIMTGYTLVYIQHSIYTDYDVIGRTFWLKLGDTTDRRDFTGIDTFFALINNLVPNTTYRVQGAFYDSIIDSELLNAQIGINLSNETNFKTKASPVITSARSESESVDVGTGAPVVVVETTGEADFCTIELKSTSTTDAPWVKYYIGALGTTIKFGGVPIGDYKIRISGQVTMPDGVTTDSSGYYELPDTLTVAYNFVPPTAPSDITFKAARIADGKERYDVRVEWDWERGNGSNVREFLVTYIDSAEYARTGWSKAQKINVGAAKAATIVSFPWKVEHTFKVSSIAWGPNEQSITESAPSTLILDEDTVLDNSFINETGIELNYAYIKGSLNDNGTWRQTFLVDAATGAISLGLLDDEGKAPISFDPLNKVVNVDGSVITKTINAASFVMTNLTGQDNPAIYTQGKSWGDNNAGIWMGMDNTIAKPKLDIGNATQWIRYDGDTLRISSGVVIGTPTGDVDIGTGLQGKQTVFVYKLGTTPPAKPTETDYPPTGWEIVPPNRTDMTQNIYTTTGTLDPVTNKLLTGTSWSNVVQWSGTEGTIGTRGSGLYTVAIDDLTAWNDSEANAFFQNNFNDAPVKYDVLTEYKTGSPQTAFTKQWSGTAWVLPAMVLHGDMVVDGTITADKIVANYAFLAQIGVDVIYNKAAALSDNPEAVYTMKIDLATGYIHIR
Physico‐chemical
properties
protein length:682 AA
molecular weight: 74174,10100 Da
isoelectric point:4,56937
aromaticity:0,10117
hydropathy:-0,17185

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
103–197
IPR057551
CCI88555.1
1 682
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-661 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiR2-01
[NCBI] 		1206557 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus R201
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCI88555.1 [NCBI]
Genbank nucleotide accession
HE956708.2 [NCBI]
CDS location
range 88749 -> 90797
strand -
CDS
ATGATTTCAAACAATGCACCAGCCAAGATGGTTCTAAATAGTATTATGACTGGGTATACGCTTGTGTATATCCAGCATTCTATTTACACAGACTACGATGTTATAGGTCGTACATTCTGGCTAAAATTAGGAGATACTACCGATAGACGTGACTTTACCGGAATCGATACATTCTTCGCTCTAATTAATAACCTTGTCCCTAATACAACGTATAGGGTACAGGGTGCGTTCTACGACTCTATTATAGATTCTGAGTTATTGAATGCACAGATTGGTATTAACCTTTCTAATGAAACCAACTTCAAAACCAAGGCTTCCCCTGTTATAACTTCTGCTAGATCTGAGTCTGAATCTGTAGATGTTGGTACAGGTGCACCAGTAGTCGTTGTGGAAACTACTGGAGAAGCAGATTTCTGCACTATTGAGCTGAAAAGTACTTCTACTACGGATGCTCCTTGGGTTAAGTATTATATAGGCGCCCTGGGGACTACTATTAAATTTGGTGGTGTACCTATTGGTGATTACAAAATCAGAATCTCTGGCCAAGTAACTATGCCAGATGGTGTAACTACGGATTCTTCTGGATATTATGAACTACCAGACACTCTTACTGTTGCTTACAATTTTGTACCCCCTACTGCTCCTTCTGACATTACTTTTAAAGCTGCTAGAATAGCTGATGGTAAAGAAAGATATGATGTTCGTGTGGAGTGGGACTGGGAACGCGGAAATGGTTCTAACGTTCGTGAATTCTTAGTTACTTATATAGATTCTGCTGAATATGCTAGAACTGGATGGTCTAAGGCTCAGAAGATAAACGTTGGTGCTGCTAAAGCCGCAACCATTGTGTCATTCCCGTGGAAAGTGGAGCATACCTTCAAGGTATCCTCTATTGCCTGGGGACCAAATGAACAAAGTATCACAGAATCAGCTCCTTCTACACTCATTCTAGACGAGGATACTGTACTTGATAATAGCTTTATTAACGAAACAGGTATTGAATTAAACTACGCGTATATAAAAGGTAGCTTAAATGATAATGGTACCTGGAGACAAACATTCTTAGTAGATGCTGCTACTGGTGCTATTAGTCTCGGACTTTTAGACGATGAAGGTAAGGCCCCAATCTCCTTCGACCCACTAAACAAAGTTGTTAACGTTGATGGTAGTGTTATCACTAAAACTATTAACGCTGCTAGCTTTGTAATGACTAACTTGACTGGGCAAGATAATCCAGCGATTTATACCCAAGGTAAGTCTTGGGGAGATAATAATGCAGGTATTTGGATGGGAATGGATAACACTATTGCCAAACCAAAACTTGATATTGGTAACGCTACCCAGTGGATTCGTTATGATGGGGATACTCTGAGAATATCTAGTGGAGTTGTTATTGGAACACCTACTGGTGATGTTGATATTGGAACTGGTCTACAAGGTAAACAAACAGTATTTGTTTACAAACTAGGTACTACTCCACCAGCGAAGCCTACTGAAACTGATTATCCTCCTACTGGTTGGGAAATCGTACCACCAAATCGTACAGATATGACTCAGAATATCTATACCACTACAGGTACTTTAGATCCTGTTACCAATAAACTTTTAACTGGTACTAGTTGGTCTAACGTGGTTCAGTGGAGTGGTACAGAAGGTACAATAGGTACTCGTGGATCTGGTCTATATACTGTTGCTATTGATGATTTAACAGCATGGAATGACTCAGAAGCTAATGCATTCTTCCAGAACAACTTTAATGATGCTCCTGTTAAATATGACGTGTTAACAGAATATAAAACTGGCTCACCACAAACAGCATTTACTAAACAATGGTCTGGAACAGCCTGGGTTCTCCCAGCTATGGTGCTTCATGGAGATATGGTAGTAGATGGTACTATTACCGCAGATAAGATTGTAGCCAACTACGCATTCCTTGCACAAATCGGGGTTGACGTTATTTATAATAAAGCTGCTGCACTCTCTGATAATCCGGAGGCAGTCTACACGATGAAGATAGACCTAGCAACTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
52c81826e71720a2ada03e6be7276c8a93460748be4786951f8c0733c5e24524
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7814
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic, physiological and proteomic characterization of the T5-like bacteriophage phiR2-01 infecting Yersinia enterocolitia Pajunen,M.I., Happonen,L.J., Jun,J.W., Malmstrom,J., Nawaz,A., Mattinen,L. and Skurnik,M. 2021-10-28 — GenBank