Protein

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Genbank accession
QMV29089.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MADLKSSSTAGGGLVWTQTNLPFSPQDVKLFYNGNEVIDSVSNQSIGGAKTFTGTLTYKTPVNSNEVAIKGYVDNLDSTSVKSVTGTLPIVVTTGVSPRVSINNATQTAHGAMSKEDKTKLDGLPVRAVNRDGDTMTGNLMVNGQVEANRIKSNGQVEVYDSATNTYAQRLVASGSLLYFQGGKVDRDVTDQRIAFSGWYGTPLTQVRFNMATGVNPQVSYGNTNYDIFHKGNLPSAEEVKAMAVYDRPPEDDCDKAIMPGNYGVFANTKNTPNDGGTGPSGSTLLVTRWGNGANAQIFFSYTQDRVWVRRQYIGVWQPWAEMYTSLNKQPVGGMGLGVGDSPNAITVTGGVRDFNLIKTNGVFTVDGNWSNGTDNTTTATTHTGIVEVKQRNVNC
Physico‐chemical
properties
protein length:396 AA
molecular weight: 42522,74400 Da
isoelectric point:6,32836
aromaticity:0,08333
hydropathy:-0,40202

Domains

Domains [InterPro]
DC_0505
ATT
1–394
DC_0505
cd19958
STR
260–324
cd19958
QMV29089.1
1 396
Architecture
ATT
ATT 1-394 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMV29089.1
1 396
Domain Start End Length (AA) Confidence
N-terminal 1 308 308 0,4853
Central domain 309 385 78 0,4275
C-terminal 386 396 10 0,7354
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-308
Central
309-385
C-terminal
386-396

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AP1
[NCBI] 		2759193 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMV29089.1 [NCBI]
Genbank nucleotide accession
MT713136.1 [NCBI]
CDS location
range 203675 -> 204865
strand -
CDS
ATGGCAGACCTTAAGAGTTCGTCTACCGCTGGGGGTGGATTAGTTTGGACACAGACTAACCTACCATTTTCCCCACAAGACGTTAAGCTGTTTTATAATGGTAATGAGGTTATTGATAGTGTTAGTAATCAATCTATTGGTGGGGCTAAAACCTTTACCGGAACATTGACATATAAAACTCCTGTCAATTCTAATGAAGTTGCCATTAAAGGTTATGTTGATAATCTTGATAGTACATCAGTGAAATCTGTAACAGGGACTCTCCCAATCGTCGTTACAACTGGTGTAAGTCCACGAGTTTCAATTAATAACGCAACACAAACCGCCCATGGGGCAATGAGTAAAGAAGACAAAACAAAACTTGACGGTTTGCCTGTTCGAGCTGTTAATAGAGATGGTGATACCATGACTGGAAACCTAATGGTTAATGGTCAGGTTGAAGCAAATAGAATCAAGTCCAACGGTCAAGTTGAAGTTTATGATTCTGCTACCAATACATATGCACAACGTCTAGTTGCATCTGGTTCCTTACTTTATTTCCAAGGTGGTAAAGTAGATAGAGACGTTACGGACCAACGAATTGCTTTTAGTGGTTGGTATGGTACACCTCTCACTCAAGTAAGATTTAATATGGCTACTGGGGTTAATCCTCAAGTGTCATATGGAAATACAAACTATGATATTTTCCATAAAGGTAATTTGCCCAGTGCGGAAGAAGTAAAGGCAATGGCGGTATATGACCGTCCACCAGAAGATGATTGCGATAAAGCAATTATGCCCGGTAACTATGGTGTTTTCGCCAACACAAAAAATACTCCTAACGACGGCGGAACTGGTCCTAGTGGGTCAACCCTTCTTGTTACTCGTTGGGGTAATGGGGCAAATGCACAAATATTCTTTTCTTATACACAAGATCGTGTATGGGTTCGTCGTCAATATATCGGTGTTTGGCAGCCATGGGCTGAAATGTATACCTCTCTGAACAAACAGCCGGTGGGTGGTATGGGTCTTGGTGTTGGTGATAGCCCCAACGCAATCACTGTAACTGGTGGTGTTCGTGACTTTAATCTAATTAAGACTAATGGGGTGTTTACCGTTGATGGTAACTGGTCTAATGGAACAGATAATACCACAACCGCAACCACTCATACGGGTATTGTTGAGGTTAAACAACGGAACGTGAATTGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
14cd252ef0f791edcdcca413c8c78bbb7077eefbae35499c68b0c2568b4d3e65
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6767
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila phage AP1 Baliga,P., Puneeth,T.G., Shekar,M. and Girisha,S.K. 2022-01-07 — GenBank