Protein

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UniProt accession
A0A1D7SNE6 [UniProt]
Protein name
Major tropism determinant N-terminal domain-containing protein
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MANRIQLRRGGAQEWANANPTLAQGELGIELDTGRFKIGDGATAWNTLRYERPVESNTNTPNSLVQRDADGSFSAGTITSTLIGNASTSTRLEQTRQIQLSNDVTATGNFDGSQNLNLSTALSLINTLPHYLEGGLSTTTRTFTEVTVDQKGRVINARTPAQLNLADYGLDGSATSDTTLAQPWNANLEAISDETGTGLYSKTAAGVVETRLITGAAGQIVITDGGGISGNPLVSLSVQANVVPGDYNTESLTSVSQAGSGGEPFGTETVNATKFSVDDKGRLTTVTNVPIATATEGSKYAAYAAGTTYVRYDIIEDSSRVYQAITGIAAGGGAPTHTDGSDAGGWRYLAAAAVEQKGLASFAQEDFDVDANGHVTIAAVGVDNTQLQNNRIGFADGNTVENFELDQELTATTGYRGFNYLNYLKVNDTSGNLLVGANNTGDSGAGELDVNVRSYFSDPDITLDGALNQTLDKTGDGNLTFQLSQNTATNRNFNILTTNAGSGSSNIIITAEDTIQISASEATGKVHVEDTKFQDNYIATTNATMNLDPGDDRAVTGLVRVWGNLQIDGTTTTINSTQLTVDDVTILLGGDTVPTTDDNLDRGIEFNYYDTEARLGFYGWDTNYSDLGGHAGGYRFLHAATNTNEVFTGTDSGIIAGNVKLTTGTNSTSNTTGDLVVAGGVGITQDVNIGGLLDVDSTLRVTSTSRFDDNVVLQGASKTLQLNNGSGTTKIEFQSTTGNGSLAGILDVTGNFNVNTNKFNVVAASGNTSIAGTLGVTNIATFSNDIDANANMTLAGDLHMESTNDITVAKNVGTGVWEIQSNDYGALRLDGGAYVAGDALIDGTLHVNGAIEVQDSATETESRLNWLRVRYRGRFGDTYQATPSYASHNTTTIRAHGGAGIERTLHVGGTGSGEGLFVGKRYSGDTVKFSVLGATGNTDIQGTFDVAGNSEFNGTVDVDADFAVRNGTTDKFFVDNVTGNTDIQGTLDVNGATEITNTLDVSNAVTFDQTLLVQGNSEFNGTVDVDANFAVRSGSTDKMTVASSSGNIATDGTLVVQGQTTINDSLIVDAANEVFSVRNGSAVEKFGVDADNGNTNIIGTLTVGDATQINDTFGASGIVTLTNNTEQTLTGSYGADGALRLTGGAAVQRNLAVGGAARVYGNTELTGTLDLNNSADISGALVTHDNVTITADNKTFAIQNASAANKFTVDTDNGNTDLRGTLDIGGDVTAESNLTVTGNLTINGTTTTVNSTVTTIDDPIITVGGDTAPASNDGKDRGVEFRYYDSSAKIGFFGYDRSANQFAFVVDATNSSEVLSGTDGNLRAGSLNLTGAGTALDVDANANIDGTLTVDGQIISQVSSGAALVIPNTTKINNLNADLLDSMTTASAATATTVVARDSSGDFAANIITVASGVGAAAGIQGNALTADTLKTARNITVAGVVSGDAEFNGSGDITITTTYVDADITALAAMAGTGFVSRTAANTYAQRTLAVTASSGITLTNADGVSGNPTINVASTASNSANNLVLRDASGDFAAGTITAALVGNVTGQTSDISNHDTGDLSEGSNLYFTNERVDDRVNALIVAGTGVTKAYNDSAGTYTLTVTQADIDTDNVTEGSTNLFTTAARTRTHFTYGTGIELSGAGALSVTQADIDTDNVTEGSTNIFYTEARFNTSLATKDTDDVSEGSSNLYFTNTRADTRADLRVAAATGANLDLSSKSTTNLSEGTNQYYTEARVQDKLDNAFAQLSAMLNNLATATTLVLNLSGDPTPGDVTTLNNGTLSGGTLYNTGTAVATTSSGSGTGLTVDITASGGAITAVAINAAGSGYVVGETITISTGGGDATINVSAVTEMAIGDTVTGSTSGTTGVITAVGATSVTVDTVDGFFKKTETVSAGDVSTLTITSFA
Physico‐chemical
properties
protein length:1907 AA
molecular weight: 195999,28700 Da
isoelectric point:4,18906
aromaticity:0,05821
hydropathy:-0,16167

Domains

Domains [InterPro]
SSF69349
STR
4–202
SSF69349 DC_1607 DC_1607 DC_0029
IPR041352
ATT
5–43
IPR041352 DC_1607
A0A1D7SNE6
1 1907
Architecture
ATT
STR
STR
RBD
ATT 4-43 | STR 44-202 | STR 345-1578 | RBD 1647-1907
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM12
[NCBI] 		1278402 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Brizovirus syn33
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
99761e8f1e80de12af4c60eb715a8e3d43d37f3b3d3abf49b6ffc9f8fc4b4fdc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5250
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50