Protein

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Genbank accession
XQQ51543.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MAVVGVPGWIGSSSVNETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGNAPIVFNITGDLVSYSKDVPLFFMYGDTPNEYVQLNIIGAHMWGRGGQGGWTHSGGDGNGQQGGHCIQNDIGGRLRINNGGVICGGGGGGGGIAYRVHSGAKWQDIGGGGGRPFGPGGGGGYSGGAASYVAPGGGYQYGNAHSGQGGDAGGNGQNAWKDGGKVLKVGAGGAAGYAVIGSAPTWQNVGIIYGPRV
Physico‐chemical
properties
protein length:265 AA
molecular weight: 26974,49300 Da
isoelectric point:8,69351
aromaticity:0,10189
hydropathy:-0,28868

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–140
DC_2135
XQQ51543.1
1 265
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-140 | RBD 141-265
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage vB_Shso_BCPShso_001
[NCBI] 		3411941 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQQ51543.1 [NCBI]
Genbank nucleotide accession
PV295201.1 [NCBI]
CDS location
range 98506 -> 99303
strand +
CDS
ATGGCAGTAGTTGGAGTTCCTGGCTGGATTGGTAGTTCATCCGTAAATGAAACAGGACAACGATGGATGAGTCAAGCGGCTGGTCAATTAAGATTGGGTGTTCCTTGCTGGATGAGTCAATTTGCAGGTCGCTCACGAGAAATTATTCACACGCTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAATGCACCTATAGTGTTTAATATTACAGGTGATTTAGTATCATATTCTAAAGATGTTCCTTTATTCTTCATGTACGGAGATACACCAAATGAATATGTTCAGTTAAATATTATTGGCGCTCATATGTGGGGTAGAGGTGGACAAGGTGGATGGACTCATTCCGGTGGAGATGGTAATGGACAACAAGGCGGGCATTGTATTCAAAACGACATTGGTGGACGATTAAGAATTAACAATGGTGGAGTAATCTGTGGTGGCGGAGGCGGTGGTGGCGGCATTGCTTACCGTGTTCACTCTGGTGCAAAATGGCAAGATATTGGTGGCGGTGGAGGAAGACCATTTGGCCCAGGAGGTGGCGGTGGTTATTCAGGTGGCGCAGCTTCATACGTCGCCCCAGGAGGTGGTTACCAATACGGAAATGCTCACTCTGGCCAGGGCGGCGATGCCGGAGGAAATGGACAAAATGCCTGGAAAGATGGCGGTAAAGTACTAAAAGTCGGGGCTGGCGGGGCGGCAGGTTATGCTGTAATAGGGTCTGCTCCAACATGGCAAAATGTTGGAATAATATATGGTCCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
db211f719a506063244166d907cba6a62f19c9fdc332aa2b7978347464e1ce60
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8463
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of Shigella phage Tevdoradze,E., Chubinidze,S. and Golijashvili,R. 2023-02 — GenBank