Protein

View in Explore
Genbank accession
QMV33154.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADVQFANNAVSRLVGPLTPSGTSLTVTPGDGALFPTLGAGDWFMATLIRADGVREIVKVTSRTVDAMSITRAQESTSALSFSPNDRIEARLTKSVLDAFRDGISSAQAAASAAQSAADGKVSKAGDTMSGNLTLPGIAVENSAPIVTFRETDQGAPAGRWRLVSDGGNWFLRRSTAGEFSSENNTMWFGADDNANFQNDILIGRGGLGSVYDALASKATTVALNNGLAGKLAGDGSSVVGFVNGDYFAPYIRKTSDNTVRQLVANTGGNAIALSWSGTFLSRTIDNSNTATIWDTANAPNIDKSFYSGDGTRIGRSWGVGSGFITLTVDGGSYGITINPSDERLKREIAPSATDALDKLGKIELFSFRYREGNPFLNAEQQHEIGFIAQQLERIDPTFAAGGGETMLSPNLLPIVATLVKAVQELRAQVDALKAQVVA
Physico‐chemical
properties
protein length:439 AA
molecular weight: 46191,95710 Da
isoelectric point:5,03010
aromaticity:0,07517
hydropathy:-0,11617

Domains

Domains [InterPro]
DC_0891
STR
1–437
DC_0891
IPR030392
CHP
341–437
IPR030392
IPR030392
CHP
341–398
IPR030392 Coil
QMV33154.1
1 439
Architecture
STR
STR 1-437 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage Gamede
[NCBI] 		2759726 Uroviricota > Caudoviricetes > Cimandefvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMV33154.1 [NCBI]
Genbank nucleotide accession
MT740738.2 [NCBI]
CDS location
range 22583 -> 23902
strand +
CDS
ATGGCTGACGTTCAATTCGCAAACAACGCTGTCAGCCGTCTTGTCGGCCCGCTGACGCCTTCCGGCACGTCATTGACGGTCACGCCGGGGGATGGTGCGCTTTTCCCGACGCTCGGCGCTGGCGACTGGTTCATGGCGACGCTGATCCGGGCGGACGGCGTGCGCGAGATCGTCAAGGTGACGTCGCGCACGGTCGACGCCATGTCCATCACGCGCGCGCAGGAAAGCACGTCTGCGCTCTCGTTCAGCCCGAACGATCGCATCGAGGCACGCCTGACTAAGAGCGTGCTGGATGCCTTCCGCGATGGCATCTCCTCCGCGCAAGCTGCGGCCAGCGCCGCGCAGAGCGCCGCCGATGGGAAGGTCTCCAAGGCGGGGGACACCATGTCCGGCAACCTCACCTTGCCGGGCATCGCAGTGGAGAATTCTGCGCCGATTGTCACGTTCCGCGAGACTGATCAGGGCGCGCCTGCCGGCCGCTGGCGTCTCGTTTCGGATGGCGGAAACTGGTTCTTGCGACGGAGCACGGCGGGCGAGTTCAGCTCCGAGAACAACACCATGTGGTTTGGTGCGGATGACAACGCGAACTTCCAGAACGACATCCTGATCGGCCGTGGTGGCCTGGGCTCGGTGTATGACGCCTTGGCGAGCAAGGCGACCACGGTGGCCCTGAACAACGGGCTGGCCGGAAAACTTGCCGGGGATGGCTCCTCGGTGGTCGGATTCGTCAACGGCGACTACTTCGCCCCGTATATCCGGAAAACGTCGGACAACACCGTGCGCCAGCTGGTGGCGAACACGGGTGGCAATGCAATCGCCCTGTCGTGGTCTGGCACGTTCCTGAGCCGCACGATCGACAACAGCAACACGGCCACCATATGGGATACCGCCAACGCGCCAAACATCGACAAGTCTTTCTACTCTGGGGACGGCACGCGTATCGGGCGGAGCTGGGGTGTCGGTAGCGGCTTCATTACTCTTACGGTGGACGGCGGCAGCTACGGCATCACGATCAATCCGTCCGACGAGCGGCTGAAGCGCGAGATCGCGCCCAGCGCCACGGACGCCCTGGACAAGCTTGGCAAGATCGAGCTGTTCAGCTTCCGCTACCGCGAGGGCAACCCCTTCCTGAACGCCGAGCAGCAGCACGAGATCGGATTCATCGCCCAGCAGCTGGAGCGCATCGACCCGACGTTCGCGGCCGGCGGCGGCGAAACGATGCTGTCCCCGAACCTGCTGCCCATCGTGGCGACGCTGGTGAAGGCGGTGCAGGAGCTGCGCGCGCAGGTGGACGCCCTCAAGGCCCAGGTGGTCGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6cf63c6987f4185000f4cc98870dc0386bb4f03e8437b7a24f84c2c436e061a1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7651
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ralstonia phages Trotereau,A., Boyer,C. and Torres-Barcelo,C. 2021-03-08 — GenBank