Protein

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Genbank accession
WYD62232.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MPVIHVQKMPGTPKETGIVPTGTNLWKWLNKSNLPASISIAVNGRVLGEDDELSFCLRDGDVVNVYCQPSGAIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTSLKAQTNIARNGEARPDNFGQIRAFPDLLQESLFEYINNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVYEPYAFDDVDGQELYGPNELDTNPPPVIIETATTTTVTETEFAGGQIAVKIPKDSAFDYFVDLTMPHDVVFKLNITYAQGGGASVTENVTLSGRLVSATETDDGGLPPVNYWYTFIINSINYSGAPISSLNGVTINNTYFNLTDNQPIVSGPYFSPIDGDQLWVHLQHQTNDGNDFSVFIEWWKIDDDNVQIPGTYQSMNYYQDVDRNDTFYYTIKLTPSAGTGRYAIQMRRTNNSSDTSILQLEEIHSIVTRRNVSYPDDTVVKVVVRATENATGSRDRKYNALITRHTIGYNRDTGTVRYTLAPSRSFADAVLHNWLITAGNSENTIDIVKLYEIADSLPDERLGYFDYSFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKREYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRNPTTNKQANVYYRITDSGIVEGEPTKAKKFDMLYVRNRYQAVDRAILECRRLIYSRRSMEIKALADGEWVNVGDLIQVVDMYDDVQQTGVIESRNGNIFTTSEQLTADDNLYVVITSSDGSVSDRLPATVTGLHTFTCNLPSDFKLNIWDGTNVQSESRYVMSTEKELDTTLWVVSQKNPGSDGTTTLTMSEYSDDMYGYVISSS
Physico‐chemical
properties
protein length:828 AA
molecular weight: 92373,48550 Da
isoelectric point:4,60574
aromaticity:0,10386
hydropathy:-0,39155

Domains

Domains [InterPro]
DC_0118
STR
1–670
DC_0118
NF040662
Unmapped
356–821
NF040662
WYD62232.1
1 828
Architecture
STR
STR 1-670 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage gmqsjt-1
[NCBI] 		3135718 No lineage information
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYD62232.1 [NCBI]
Genbank nucleotide accession
PP530290 [NCBI]
CDS location
range 42375 -> 44861
strand +
CDS
ATGCCAGTAATTCATGTTCAGAAGATGCCGGGCACACCGAAAGAAACGGGGATTGTGCCAACGGGGACAAACCTGTGGAAGTGGCTGAATAAATCAAACCTACCTGCCAGCATTTCAATTGCGGTAAATGGCAGAGTGCTCGGTGAAGATGATGAACTTTCCTTCTGCCTGCGCGATGGCGACGTGGTCAACGTTTATTGCCAGCCGTCAGGCGCAATTGGCGACCTTATCGGCGCGATACTGAAACCGGTAACGAAGATTTTCTCATTTCTTACGCCGAAGGTATCCACGCCAAAAACGGATACCAGCTCCAAAACATCACCAAACACCAGCCTTAAAGCGCAGACCAACATTGCTCGCAACGGCGAGGCGCGTCCAGATAACTTCGGGCAGATTCGCGCGTTCCCTGATTTGCTTCAGGAATCATTATTCGAATACATCAATAATATTAAATACGTCACTGAGTTCATGAATTTTGGCCTCGGTAAATATGATGTTTCTTCTGTGCGTTACTCCGAGTCAAACCTCGGCTCACTGGCTGGTGCTAGTTACACCATTTATCAGCCGGGAGAGGTTATTCCGGTTGTGTACGAACCTTACGCATTTGATGATGTTGATGGACAGGAACTGTACGGGCCAAACGAACTGGATACTAACCCACCACCAGTAATCATTGAAACTGCAACAACCACCACGGTCACAGAAACAGAATTTGCTGGTGGTCAGATAGCTGTCAAGATACCGAAGGATTCAGCATTTGATTACTTCGTTGACCTAACCATGCCTCATGATGTGGTGTTTAAGCTGAATATCACTTATGCACAAGGTGGCGGCGCATCTGTCACCGAAAACGTCACGCTATCAGGAAGACTTGTGTCGGCAACAGAAACTGATGATGGTGGATTGCCACCAGTAAACTACTGGTACACATTTATTATTAACAGCATCAACTACTCAGGTGCGCCAATATCATCACTGAATGGCGTGACGATTAATAACACCTATTTCAACCTGACAGATAACCAGCCTATTGTTTCCGGTCCGTACTTTTCACCGATTGATGGTGATCAGCTTTGGGTGCACCTGCAACACCAGACCAATGATGGCAATGATTTCAGCGTGTTCATTGAGTGGTGGAAGATTGACGACGATAACGTTCAGATTCCAGGAACATATCAATCAATGAATTATTATCAGGACGTGGACAGGAACGACACGTTCTACTACACAATAAAGTTAACACCATCTGCTGGCACTGGTCGTTATGCCATCCAGATGAGAAGGACAAACAACAGCTCGGACACATCAATCCTTCAGCTTGAGGAAATACACTCAATCGTCACGCGCAGAAACGTTTCGTATCCAGATGATACGGTGGTTAAAGTAGTTGTGCGAGCCACAGAGAACGCAACAGGCAGCCGTGACAGGAAATATAATGCGCTAATCACGAGGCACACCATCGGATACAACCGTGATACTGGCACTGTGCGCTATACACTTGCGCCATCACGTAGCTTTGCTGATGCTGTTTTGCATAACTGGCTGATTACCGCTGGCAATTCAGAAAACACAATTGACATTGTGAAGCTGTATGAAATTGCCGACAGCCTGCCTGATGAGCGATTGGGTTATTTCGATTACTCGTTTGACGATGAGGATAAGAGCATCGGCGAGCGTTTGCAGACCATCTGCGATGCGGCGCGTGTCACCGCGTTCTGGGATGATGGCGTAATGAGCTTCTCTCGTGATGAAAAGAGAGAATATCCAGCTACTGTATTCAACACCAGAAACACGCAGAGCGACGGTTACAAGCTGAGTTATGACATCAGTCTTCCTGGCACTTACGATGGCGTTAACGTCGAATATCGCAACCCAACAACGAATAAGCAAGCCAACGTTTACTACCGAATTACCGATAGCGGAATAGTCGAAGGCGAACCAACGAAAGCCAAGAAATTCGACATGCTTTATGTTCGCAATCGCTATCAGGCTGTTGACCGGGCAATCCTTGAGTGTCGCCGTCTTATCTATTCCCGCCGCAGCATGGAAATTAAAGCTCTGGCGGATGGAGAGTGGGTTAACGTAGGCGACCTGATTCAGGTCGTCGATATGTATGATGACGTTCAGCAGACTGGCGTGATTGAGTCGCGCAACGGAAACATATTCACGACCAGTGAGCAGTTAACCGCTGATGACAATCTCTACGTTGTGATCACCAGTTCTGACGGCAGCGTATCAGACAGATTGCCAGCGACGGTAACCGGATTGCATACATTCACCTGCAACCTGCCATCTGATTTCAAGTTAAACATATGGGATGGCACTAATGTTCAAAGTGAATCACGTTACGTGATGAGCACGGAGAAAGAACTGGATACCACACTGTGGGTTGTCAGTCAGAAGAATCCCGGTAGCGACGGAACCACAACGCTGACGATGAGTGAATACAGCGACGACATGTACGGATATGTTATCTCATCATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
937e0fa3cb23124eb95020b2e938115bcbcb8ec412f01f4d221b34df7348e416
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2885
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A new strain of lysable Salmonella bacteriophage Guo,M., Zhang,L. and Su,Z. 2013-12 — GenBank