Protein

View in Explore
Genbank accession
XTQ13967.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MANLVFKFSWDHRPFPYNASQGKRQFMLPFASGIPNLAPNFSQVVGTAAISQGGTGATTAAGARANLGAAASGVNSDISELKGLTTPLSISQGGLGADNAQTARMNLGLGTAAVLASTTSQYDPTPGRALRVGDWGIGAEGSRVSDMVAPLNNGFFRTDDTLTNDTGNSIGPYGFFLHCTRRSMGLYTNGSHSFQLGKAASYSALKYRFNTSGTWSNWFNLLTAQNTTTDGNGFIKAASPVVKLFQSHIELNNDAAKQPITFDKLGTGDYLIKGSLGFAQEGWYIEVPKDASGNTIVAVVYDTLENGDISIKTYKRKFDFELAAVVADHENPMDIPEGRWIDIRLHEEPEPEPEEPLSETPVDFQPTNLSQAVAAAMNGVEPPEISETDETL
Physico‐chemical
properties
protein length:392 AA
molecular weight: 41945,12140 Da
isoelectric point:4,87044
aromaticity:0,09184
hydropathy:-0,28903

Domains

Domains [InterPro]
DC_0709
STR
45–375
DC_0709
IPR058008
RBD
226–346
IPR058008
XTQ13967.1
1 392
Architecture
STR
STR 45-375 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage LPAB65
[NCBI] 		3421155 No lineage information
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTQ13967.1 [NCBI]
Genbank nucleotide accession
PV612228.1 [NCBI]
CDS location
range 9752 -> 10930
strand +
CDS
ATGGCAAATCTTGTTTTTAAATTTAGTTGGGATCATCGGCCATTCCCATATAACGCCTCACAGGGCAAGCGGCAGTTTATGTTGCCATTTGCGTCAGGTATTCCCAATCTGGCACCCAACTTTTCTCAAGTAGTTGGTACTGCAGCTATCTCTCAAGGTGGAACGGGGGCAACTACAGCGGCTGGTGCACGAGCTAACCTAGGCGCAGCTGCAAGTGGGGTAAATAGTGATATTAGTGAGCTTAAGGGACTTACAACCCCTTTATCAATTTCTCAGGGAGGATTAGGAGCTGATAATGCACAGACAGCTAGAATGAATTTGGGGTTAGGAACTGCTGCTGTACTAGCGTCAACAACAAGTCAATATGATCCTACGCCGGGACGAGCACTAAGAGTCGGTGATTGGGGGATAGGGGCTGAAGGTTCTCGTGTATCTGATATGGTTGCTCCTCTTAATAATGGTTTTTTTCGAACAGATGACACTTTAACAAATGATACTGGTAATAGTATTGGTCCTTATGGTTTCTTTTTACACTGTACCCGACGCTCAATGGGTTTATATACAAATGGAAGTCATTCATTTCAGCTTGGGAAAGCTGCCTCATATTCTGCCCTGAAGTATCGATTTAATACTAGTGGTACTTGGTCTAATTGGTTTAATTTATTGACTGCACAAAATACTACAACTGATGGAAATGGTTTTATTAAAGCCGCTTCACCAGTCGTTAAGCTTTTCCAAAGTCATATTGAGCTAAATAACGATGCTGCCAAGCAACCGATCACTTTTGACAAATTAGGCACTGGTGACTATCTGATTAAGGGCTCTTTAGGCTTTGCTCAGGAAGGCTGGTATATCGAAGTACCGAAAGATGCAAGCGGCAACACAATCGTCGCAGTAGTGTATGACACCCTAGAAAATGGTGACATCTCAATTAAAACTTACAAGCGTAAGTTTGATTTTGAACTTGCTGCTGTTGTGGCAGATCACGAGAACCCAATGGACATTCCAGAAGGCCGCTGGATTGATATCCGTCTGCATGAAGAACCTGAACCAGAGCCTGAAGAGCCGTTGAGTGAAACACCAGTGGATTTCCAGCCGACTAACTTATCTCAGGCAGTTGCTGCAGCCATGAATGGCGTGGAACCGCCAGAAATCTCAGAAACAGACGAAACACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1b38b6a39a7fcb423f35fec90e5279eaa28579b569bb78952fa3698063f64ee0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7529
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lpab65 Li,J. — — GenBank