Protein

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Genbank accession
QVD49366.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSKPLPGIFAVLRQLELTKAGVAKLHFVVETEEGLRHLSVDEFLKLISSTKAPQQIALANPAVDPNDPQILALQKAIDGLRAQVNERITDLEPYYVEQSPQEAFVPDESVALGTDALLGGAVDRENVAIGLCAGLKLDGDGNVAIGPYASHDVDGVLTDTVAIGREAMADLSGDFENVVALGAYTHPSGSHQVILGDTRANVYTASSPQRRNDARDFTQIKDNPLGLEFILGLRTIQYQEDFRERYIDWDNKPIEPTAPGPEPERPQLALNDPNYQSTVVSYRLQKSNWDKQVAQYEIDMATYVSNLDQWVKDNQMHRLNPDGSKAGKRIHLGLAQGQLKQQIERTGLDLAMIQDHAVAGGASVQTIADVEAIAPLIKAVQELHAELHSATTIDRLASALMQRHTELTEQAIAELSSAAAALSSAKAE
Physico‐chemical
properties
protein length:428 AA
molecular weight: 46528,70180 Da
isoelectric point:4,85112
aromaticity:0,05140
hydropathy:-0,28458

Domains

Domains [InterPro]
DC_0299
STR
48–428
DC_0299
IPR011049
STR
102–213
IPR011049
QVD49366.1
1 428
Architecture
STR
STR 48-428
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_XciM_LucasX
[NCBI] 		2829408 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVD49366.1 [NCBI]
Genbank nucleotide accession
MW825358.1 [NCBI]
CDS location
range 261460 -> 262746
strand +
CDS
ATGAGTAAGCCATTACCCGGCATTTTTGCCGTGCTGCGCCAGTTGGAACTGACCAAAGCCGGCGTGGCCAAGTTGCACTTTGTCGTGGAGACCGAAGAAGGTCTGCGACACCTGTCGGTGGATGAGTTTCTCAAGCTCATCTCATCTACAAAAGCACCCCAGCAGATTGCATTGGCCAATCCAGCTGTCGATCCCAACGATCCGCAGATCTTGGCTCTGCAAAAGGCCATTGATGGACTGCGTGCCCAGGTCAATGAACGCATCACCGATCTGGAGCCCTACTACGTAGAGCAATCGCCGCAGGAAGCTTTTGTGCCTGATGAATCGGTGGCACTGGGAACAGATGCCTTGTTAGGTGGAGCGGTTGACCGTGAGAATGTGGCTATCGGTTTGTGTGCAGGCTTAAAGTTAGACGGTGATGGTAATGTGGCCATTGGTCCTTATGCCAGCCACGACGTGGACGGTGTGCTGACCGATACGGTAGCCATTGGTCGAGAGGCTATGGCCGATCTGAGCGGGGACTTTGAAAACGTGGTGGCCTTAGGTGCCTACACCCACCCATCAGGTTCTCACCAGGTGATTCTGGGCGATACCCGCGCCAATGTCTACACTGCCTCCAGTCCGCAACGCCGCAACGATGCCCGCGACTTTACCCAGATCAAGGACAACCCGTTGGGGCTGGAATTCATCTTAGGGCTGCGCACGATTCAATATCAGGAAGATTTCCGCGAGCGGTATATCGACTGGGACAACAAGCCCATCGAACCCACAGCACCGGGCCCGGAACCTGAGCGGCCGCAGCTGGCGTTAAACGATCCTAACTACCAATCCACGGTGGTGTCCTATCGACTGCAAAAGTCCAATTGGGACAAACAAGTGGCGCAGTATGAAATTGACATGGCCACCTATGTCAGCAATTTGGACCAATGGGTCAAAGACAACCAGATGCACCGCTTGAACCCGGATGGGTCCAAGGCGGGTAAGCGCATCCATTTAGGGTTGGCCCAAGGCCAGCTTAAGCAGCAGATCGAACGGACGGGTCTGGATCTGGCCATGATTCAAGACCACGCAGTGGCAGGCGGTGCTTCAGTGCAAACCATTGCCGATGTTGAAGCCATCGCCCCGTTGATCAAGGCCGTCCAAGAACTCCATGCCGAACTGCACAGTGCCACGACTATCGATCGACTGGCCAGTGCACTGATGCAACGTCACACTGAACTGACCGAACAGGCCATCGCCGAGCTGTCCTCTGCGGCAGCGGCTTTATCCTCGGCAAAAGCTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
93fd63d9524188c7e5cc6e1727e45cbf6e4044df51e2a3388fe4dc14ea69975a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7564
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50