Protein

View in Explore
Genbank accession
QIG73243.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,54
Protein sequence
MASLASALTKKLARKPGRSLIGYGDAAAPVTPVYSFNEKTSLFADNCAMGPWYALSTTPPIIKVANGDVWASYQGFDWVNGLGLENKVRVCSNGVWGPEYPALLCDSSTDNHGSAAMLETTGGYKHNFGGTHNQAMRHAVTTTPGNPATFTRQADIGNNYSYPHPVEGPDGNIHLLMRKLVTAENRMPLVVVKSTAMVSGIPTWGAEKELINFENDTRYYQGGMVEIGNEVHMTAVKADFNDTVRRNVYYVIYDKSNGNIYNHDKSVTVLPAAQPINLATMNASFRIVDQEGAGTFGQIPSLAIDAAGNKHVAYIDGSGVTRSVKVLSIVGGVIGSSVTIDTVSSAQASVCIRKMDDGQRLELAWAKENTFSYPGGGGDIWRAERSAAGIWSAPFKIAAATKMYALGSITPVYKGSDDLAFAFGELVGTSTTDVENGYILRAYMYGSGGFVSRAAAYDSDAQNYFNSMIVQENDSTKAALDAFYKVLKNLGKYDKFEGLHFGGVQTQQAALIDLTARHTLAVDGSPAFVPGVGFDPDGVDDLLRFGFNPSSTPNLKIAQTAFMLWEFVLDEGQETNASMGTLAAASPTISLVPRNPSDAATTRLNDGTSLTVTGQTVAYGMWAARRSGSTKEIYHNRTRIGTTTLAATGTANGEACLFGSGSGRSNKRVPIAFWTTSNFSTLSAPAIVNAVVRLLMETGVISADIPD
Physico‐chemical
properties
protein length:707 AA
molecular weight: 75432,89700 Da
isoelectric point:5,99102
aromaticity:0,09194
hydropathy:-0,13098

Domains

Domains [InterPro]
DC_0727
STR
28–707
DC_0727
PF15892
STR
107–316
PF15892
QIG73243.1
1 707
Architecture
STR
STR 28-707
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG73243.1
1 707
Domain Start End Length (AA) Confidence
N-terminal 1 521 521 0,0195
Central domain 522 696 176 0,3241
C-terminal 697 707 10 0,9406
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-521
Central
522-696
C-terminal
697-707

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N17
[NCBI] 		2509742 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG73243.1 [NCBI]
Genbank nucleotide accession
MN988530 [NCBI]
CDS location
range 13628 -> 15751
strand +
CDS
ATGGCGTCGCTCGCTTCTGCCCTCACTAAGAAGCTCGCTCGAAAGCCCGGAAGGTCATTGATCGGTTACGGGGATGCTGCAGCCCCTGTCACCCCAGTCTATTCGTTTAACGAGAAGACTTCTCTGTTCGCCGATAACTGCGCCATGGGGCCATGGTACGCGCTCTCCACGACGCCGCCCATTATAAAGGTCGCCAACGGTGACGTTTGGGCGAGCTATCAGGGCTTCGATTGGGTGAACGGGCTCGGGCTCGAAAACAAGGTCCGGGTTTGTTCCAACGGCGTATGGGGGCCGGAATACCCGGCTCTTCTGTGCGACAGCTCGACCGACAATCACGGGTCGGCGGCGATGCTCGAAACGACGGGCGGCTATAAGCACAATTTCGGCGGCACCCACAATCAGGCGATGCGGCACGCCGTCACGACGACGCCTGGGAACCCGGCGACGTTCACCCGTCAAGCGGACATCGGCAACAATTACAGCTACCCTCATCCTGTAGAAGGCCCGGATGGCAACATCCATCTGTTAATGCGCAAGTTGGTAACAGCGGAAAACCGGATGCCGCTCGTTGTCGTCAAGTCAACAGCAATGGTGTCCGGCATCCCGACCTGGGGCGCTGAAAAAGAGCTTATCAATTTCGAGAACGATACCCGCTATTATCAAGGCGGGATGGTCGAGATCGGTAATGAAGTTCACATGACTGCGGTAAAGGCGGATTTCAACGACACGGTTCGGCGTAACGTTTATTATGTGATTTACGACAAGTCTAACGGCAACATCTACAATCACGATAAGTCCGTGACAGTTCTTCCCGCCGCTCAACCGATCAACCTGGCGACGATGAACGCCAGTTTCAGGATTGTTGACCAAGAAGGCGCCGGTACATTCGGGCAGATCCCAAGCCTCGCGATTGACGCAGCTGGCAACAAGCATGTTGCCTACATAGACGGCTCCGGCGTGACCCGGTCGGTTAAAGTACTGTCTATCGTCGGCGGTGTTATTGGTTCGTCTGTAACGATTGACACGGTGTCTAGTGCTCAAGCATCGGTCTGCATTCGTAAGATGGACGACGGACAGAGGCTCGAGCTCGCATGGGCGAAAGAGAACACGTTCTCTTACCCAGGCGGCGGGGGCGATATATGGCGTGCGGAAAGGTCGGCAGCAGGTATTTGGAGTGCCCCGTTTAAAATCGCCGCCGCAACCAAAATGTATGCACTCGGCAGCATCACACCGGTCTACAAGGGTTCCGACGATCTGGCGTTTGCGTTCGGCGAGCTGGTCGGCACGTCTACAACAGATGTAGAAAACGGTTACATCCTACGAGCCTACATGTACGGCTCAGGTGGTTTCGTCTCGCGAGCTGCCGCTTACGACAGCGACGCTCAAAATTACTTCAACTCGATGATCGTCCAGGAAAACGACAGCACGAAGGCCGCGCTAGACGCCTTCTACAAGGTGCTGAAAAATCTCGGCAAGTATGACAAGTTCGAGGGCCTCCATTTCGGCGGCGTTCAGACGCAGCAGGCCGCGCTTATCGACCTGACCGCTCGACACACATTGGCTGTAGATGGTAGCCCGGCCTTCGTCCCCGGCGTTGGTTTCGACCCAGACGGGGTTGATGACTTGCTTCGCTTTGGGTTTAACCCTTCCAGCACGCCGAACTTGAAGATCGCACAGACGGCATTCATGCTTTGGGAGTTCGTACTTGACGAAGGACAAGAAACCAACGCTTCCATGGGCACACTTGCCGCCGCTAGCCCGACAATCAGCCTTGTGCCTCGCAACCCCAGTGACGCGGCCACGACCAGGTTGAACGACGGAACGTCGCTGACCGTCACCGGTCAGACTGTAGCTTACGGCATGTGGGCTGCTCGGCGCAGCGGATCAACGAAAGAGATATATCATAACCGAACTCGCATTGGGACAACTACGCTTGCCGCAACTGGCACGGCTAATGGCGAAGCTTGCCTATTTGGCTCCGGCTCAGGTCGATCCAACAAACGTGTTCCAATAGCTTTCTGGACGACCTCGAATTTCTCGACTCTTTCAGCACCAGCAATCGTAAACGCAGTGGTTCGACTTCTCATGGAAACGGGTGTCATCTCTGCGGACATTCCCGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0aaf9e3dcb3127dedf71d35d58993536a1f48512dba4e94685d1a0d0b82ba3c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank