Protein

View in Explore
Genbank accession
YP_010646328.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,62
Protein sequence
MQIWIHDKSMRKVCALNNNVPGMLPYSNSQWHTYLEYSSSTFDFTIPKIVNGKLHDDLKYINDQMYVSFYYDNSYHVFYVSQLVEYDFSFQVTCNNTNLELAAEISRPLASVDGPKTLEWYLRNLELLGFAGLEIGVNEISDRTRTLTFESQSGTKLEQLHSLMNQFDAEFIFRTELNRDGTLKRFVIDIYQRPDENHHGIGKVRGDVILYYQTGLKGVQVSSDKTQLFNYGYFLGKDGLNLASVELEEKNELGKIEFYTPKGDPVIYAPLSADKYPSSLGGANETDRWTRRDFQTEYSDVDSLKAYALRTIKQYAYPLMTYTVSAQSSFIENYKDINLGDTVKIIDNNFRGGLALEARVSEMIISFDNPANNSVVFTNFKKLDNKPSSELQRRIDEIISKSLPYHVETRTTNGTAFKNGIGRSTVKPVLKQGDKIVDATYRFVIDGSIVSSGLTYTVKASDITKPTVVTISAWVDNKEVASEEITFFNVSDGEQGPKGDRGEQGPKGDRGEQGPKGNQGIPGPKGSDGKTQYTHIAYADTISGSGFSQTDVNKAYIGMYQDFNAEDSKNPQDYRWSKWKGSDGKDGIPGKAGADGKTPYVHFAYADSADGQTGFSLTQTGSKRYLGVLTNFIKEDSTNPSDYTWNDTAGSVSVGGRNLLLKTNQGVTNWNWDLSDGDKIVEEIKVDGIRAVKLIKGSTTANTGWNYISYHGLLRELIQPNTKYVLSFDVKPSVDVRLNATLVRGDFNELLTDYVPMNKANANQWTKVSCVLTSKETLPDDLTQFVYLSGMPTTNGNWVIIKNIKLEEGEIPTQWTPALEDTQDQINSKADDVLTQAQLNRLNETNSIIKAELDAKASLDTLNQWVEAYQDFVSSNNANRAQAEKDLADASARVTKLYNDLNDMSERWNFIDSYMTASNEGLVVGKTDNSSSMLFSPNGRISMFSAGHEVMYISQGVIHIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:994 AA
molecular weight: 111274,65780 Da
isoelectric point:5,17106
aromaticity:0,10262
hydropathy:-0,52062

Domains

Domains [InterPro]
DC_0002
STR
1–587
DC_0002 IPR008979 Coil
IPR010572
ENZ
142–382
IPR010572 IPR008160 DC_0002
IPR050149
Unmapped
493–597
IPR050149 G3DSA:2.60.120.260
YP_010646328.1
1 994
Architecture
STR
STR 1-994
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC979
[NCBI] 		2365058 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010646328.1 [NCBI]
Genbank nucleotide accession
NC_070683.1 [NCBI]
CDS location
range 14779 -> 17763
strand +
CDS
ATGCAAATCTGGATTCATGATAAAAGTATGCGTAAGGTGTGTGCTTTGAATAACAACGTTCCTGGCATGCTTCCGTACTCAAACAGTCAATGGCACACCTACCTTGAATACTCAAGCAGTACATTTGACTTCACAATTCCTAAAATTGTAAATGGCAAGCTACACGATGATTTAAAATACATCAATGACCAAATGTATGTGTCGTTTTATTATGATAATTCCTACCACGTTTTCTATGTCTCTCAACTCGTTGAATATGATTTTAGTTTTCAAGTGACTTGTAACAATACCAACTTGGAACTTGCAGCAGAAATATCGCGTCCTTTAGCCAGTGTTGATGGTCCTAAAACACTTGAGTGGTATCTTCGGAATCTTGAATTGCTTGGTTTTGCAGGACTTGAAATAGGTGTCAATGAAATTTCTGATAGGACAAGAACGCTTACTTTTGAATCACAAAGTGGCACAAAGCTAGAACAACTTCATAGCTTGATGAATCAATTTGATGCTGAATTTATTTTTCGTACCGAATTAAACCGAGATGGCACTTTGAAACGCTTCGTCATTGACATTTACCAACGCCCCGATGAAAACCACCATGGGATTGGTAAGGTCCGAGGTGACGTCATTCTCTATTATCAAACAGGATTGAAAGGCGTCCAAGTATCTAGCGATAAGACCCAACTTTTTAACTATGGCTATTTTCTCGGAAAAGACGGCTTAAACCTTGCAAGTGTTGAATTAGAGGAAAAGAACGAGTTAGGAAAAATAGAGTTTTATACTCCTAAAGGCGACCCTGTTATTTACGCACCACTGTCAGCAGATAAATATCCATCCTCTTTAGGCGGAGCTAACGAAACAGATAGATGGACACGTAGGGACTTTCAGACAGAATACAGTGATGTTGATTCCCTAAAGGCTTATGCCTTACGTACTATCAAGCAGTATGCTTATCCACTAATGACTTATACTGTCAGCGCTCAATCTAGTTTTATTGAAAACTACAAGGATATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTAGAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCTGCGAATAATTCAGTAGTTTTCACCAACTTTAAAAAGTTGGATAATAAACCGTCTAGCGAATTACAACGACGTATCGATGAGATTATTTCTAAATCATTGCCATATCACGTTGAGACAAGGACCACGAATGGTACAGCATTTAAGAATGGTATTGGTCGTTCTACTGTTAAACCAGTTTTGAAACAAGGCGATAAAATTGTTGATGCAACATATCGCTTTGTAATTGATGGCTCTATTGTTAGCTCTGGTCTGACCTATACCGTCAAAGCAAGCGATATCACAAAACCAACTGTGGTAACAATTTCCGCTTGGGTAGATAATAAAGAAGTTGCTTCAGAAGAGATTACTTTTTTTAATGTATCAGATGGGGAACAAGGGCCAAAAGGTGACCGTGGTGAACAAGGGCCAAAAGGTGACCGTGGTGAACAAGGGCCAAAGGGAAATCAAGGTATTCCCGGACCTAAAGGTTCTGACGGAAAAACCCAATATACACATATTGCATATGCTGATACAATTTCAGGTAGTGGCTTTAGTCAAACAGATGTCAATAAAGCCTATATTGGTATGTATCAAGACTTCAATGCCGAAGATAGCAAAAACCCACAAGATTATCGATGGTCTAAGTGGAAAGGTAGCGATGGTAAAGATGGGATTCCTGGTAAGGCTGGGGCAGACGGGAAAACACCTTATGTCCACTTCGCTTACGCAGATAGCGCCGATGGTCAAACTGGGTTCAGTTTAACACAGACTGGAAGTAAACGCTATTTAGGTGTGCTAACCAACTTCATAAAAGAAGACAGCACTAACCCATCTGATTATACTTGGAATGACACTGCTGGAAGTGTTTCAGTTGGTGGTCGGAACTTGCTTTTAAAAACAAATCAAGGTGTTACTAATTGGAATTGGGATCTTTCTGATGGCGACAAGATCGTTGAAGAAATAAAAGTTGATGGCATTCGTGCTGTAAAACTAATCAAAGGTTCAACAACAGCAAACACTGGTTGGAATTACATTTCATATCACGGTTTGCTGCGTGAACTCATACAGCCGAACACTAAGTATGTTCTTTCGTTCGATGTTAAACCAAGCGTTGATGTACGTTTAAATGCAACGCTGGTAAGAGGTGACTTTAATGAGTTGTTAACTGACTATGTTCCTATGAATAAAGCTAATGCAAATCAGTGGACTAAAGTATCATGTGTATTGACAAGTAAAGAAACTCTTCCAGATGATTTAACTCAATTTGTCTACTTATCAGGTATGCCAACAACAAACGGTAATTGGGTAATAATTAAAAATATCAAACTCGAAGAAGGTGAAATACCTACTCAGTGGACACCAGCTTTGGAGGACACGCAAGATCAAATCAATAGCAAAGCTGACGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACGAACTCTATTATTAAAGCTGAATTAGACGCTAAAGCATCACTTGATACACTCAATCAGTGGGTGGAAGCCTATCAAGATTTTGTTAGCTCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACAAAACTATACAATGACTTAAATGATATGTCAGAACGTTGGAATTTCATTGATAGCTACATGACTGCATCAAACGAGGGTCTTGTTGTTGGTAAAACTGATAATTCTAGTTCTATGCTTTTCAGTCCTAATGGGCGTATCTCAATGTTCTCAGCTGGGCACGAGGTAATGTATATCTCGCAAGGTGTGATTCATATTGAGAATGGTATTTTCTCGAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
805f4c04fd21b0860d190db9c332d85b1b5bb25a7ffe8fa44a8aa794132379f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7449
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank