Protein

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UniProt accession
A0A0H4IU95 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSVVVSGTLKSPDGEAISGANITLTALTVSPDALSGTSASAVTREGGYYGMTMDPGEYAVSVTVKGKTAVYGRVRIEGTESTVTLNMLLRRSLVEVSIPGELLTDFRQIQNNVADDLANIRRLNEDTATKNTQATQSKESAAASAKSASDSAKTATSRAAEAGQKATDATEAATRAVTAAGNAEESSTRAGESEKAAGADAEKARQHAEKARLAQESAGEILKRAEAATVSAEEARRMAENARGPRGPQGETGPKGDVGPKGETGPVGPQGPAGPKGERGDVGAQGAVGPAGPRGEKGEQGERGPQGIPGLKGDTGERGPKGDQGDMGPKGEKGDPGGPAGPQGPKGERGEAGPQGPMGARGERGETGPRGEPGPAGPRGERGETGPQGPRGEPGPAGSAANVADATTAQKGIVQLSSATDSDDEAKAATPKAVKAAMDVANEAKTKAEEAAAGGGVPGPKGDKGDSGPAGPAGPRGVQGPKGDPGPQGPKGDTGAAGAKGEKGATGATGPQGPKGDTGAVGPAGPQGPKGDTGAAGPAGPQGPKGDTGAAGPAGAQGPKGDKGDPGVAGPAGPAGAPGPKGDKGDPGVAGPAGPEGPQGPKGDTGAPGQGTELLTTANTWTQAQTFNGGINGNLTVNGNGSFNDVQIRSDKRNKRNLVKLDNALDRLEALTGYLYEIQYSADGWQTSVGLIAQDAQKALPELVTEDADVISGEKRLRLNYNGIIALLVEGFKTLRHEIKELREK
Physico‐chemical
properties
protein length:745 AA
molecular weight: 73791,96330 Da
isoelectric point:5,39222
aromaticity:0,01879
hydropathy:-0,74940

Domains

Domains [InterPro]
PF13620
ENZ
5–86
PF13620 PTHR24637 IPR008160 IPR005068 IPR008160 IPR008160 IPR030392
IPR008969
ATT
5–93
IPR008969 Coil IPR008160 IPR030392
G3DSA:2.60.40.1120
STR
5–97
G3DSA:2.60.40.1120
DC_1202
STR
20–745
DC_1202
A0A0H4IU95
1 745
Architecture
ATT
STR
ATT 5-93 | STR 94-745
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Ss-VASD
[NCBI] 		1675531 Uroviricota > Caudoviricetes > Sepvirinae > Oslovirus VASD >
Host Shigella sonnei
[NCBI] 		624 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKO62163.1 [NCBI]
Genbank nucleotide accession
KR781488 [NCBI]
CDS location
range 42616 -> 44853
strand +
CDS
GTGAGTGTTGTTGTTTCGGGGACGCTGAAATCTCCTGATGGTGAGGCGATATCAGGAGCAAATATTACCCTGACGGCGCTGACAGTTTCACCGGATGCGCTCAGCGGCACCAGTGCGTCAGCAGTGACCCGTGAAGGTGGATATTACGGAATGACGATGGATCCGGGGGAGTATGCGGTTTCTGTGACGGTGAAAGGGAAGACTGCTGTCTACGGACGTGTGCGTATTGAGGGGACTGAAAGTACGGTGACGCTCAATATGCTGTTACGCCGCAGTCTTGTTGAGGTTAGCATACCCGGAGAACTGCTGACAGATTTCCGGCAGATACAGAATAATGTGGCTGATGACCTTGCCAATATTCGTCGCCTGAATGAAGACACGGCGACAAAAAACACTCAGGCCACACAGTCAAAAGAAAGTGCAGCAGCCAGTGCGAAGAGTGCATCTGACAGTGCAAAGACGGCAACCAGCAGGGCGGCTGAAGCCGGACAAAAAGCGACTGATGCCACTGAGGCTGCGACCCGTGCAGTCACAGCAGCGGGGAATGCAGAGGAAAGCTCGACCCGTGCCGGAGAGTCTGAAAAAGCCGCCGGAGCTGATGCAGAAAAAGCCAGACAGCATGCTGAAAAGGCCAGGCTGGCGCAGGAGAGCGCCGGAGAGATCCTTAAGCGGGCAGAGGCTGCCACTGTCAGTGCTGAAGAGGCCAGACGTATGGCTGAGAATGCACGGGGGCCCCGGGGGCCTCAGGGAGAAACTGGTCCGAAGGGGGATGTCGGTCCTAAAGGCGAAACAGGTCCAGTGGGCCCTCAAGGGCCCGCAGGGCCGAAAGGTGAGCGTGGTGACGTTGGTGCTCAGGGGGCTGTAGGGCCCGCTGGTCCGCGTGGTGAGAAGGGCGAACAGGGGGAGCGAGGACCGCAGGGAATACCAGGCCTGAAGGGGGATACCGGAGAGCGGGGGCCTAAAGGGGACCAGGGGGATATGGGGCCAAAAGGCGAGAAAGGTGATCCGGGAGGTCCTGCAGGCCCGCAAGGTCCTAAAGGTGAACGAGGAGAAGCCGGACCACAGGGACCGATGGGAGCACGAGGTGAGCGTGGGGAGACTGGCCCCCGAGGTGAACCAGGTCCTGCAGGTCCGAGAGGCGAACGAGGAGAGACCGGACCTCAGGGACCTCGTGGAGAGCCAGGTCCGGCAGGCAGCGCTGCAAATGTGGCTGATGCGACGACGGCACAGAAGGGAATTGTGCAGTTAAGCAGCGCAACGGACAGTGATGATGAAGCGAAGGCAGCCACCCCGAAAGCGGTGAAAGCGGCAATGGATGTGGCAAATGAAGCGAAAACAAAGGCAGAAGAGGCTGCAGCAGGAGGTGGTGTTCCCGGTCCGAAAGGAGATAAAGGGGACTCGGGGCCAGCAGGTCCGGCTGGGCCGAGGGGCGTTCAGGGACCGAAAGGTGATCCCGGCCCCCAGGGACCAAAGGGGGATACTGGCGCTGCTGGGGCAAAGGGTGAGAAAGGAGCCACCGGCGCAACCGGGCCACAGGGACCTAAAGGGGATACGGGAGCCGTAGGCCCGGCAGGACCGCAGGGACCTAAAGGGGATACGGGAGCCGCAGGCCCGGCAGGACCGCAGGGACCTAAAGGGGATACGGGAGCTGCAGGCCCGGCAGGCGCACAGGGACCAAAAGGTGACAAAGGCGATCCGGGGGTGGCTGGACCAGCAGGTCCGGCAGGTGCGCCGGGGCCGAAAGGCGATAAAGGTGATCCGGGAGTAGCAGGTCCAGCAGGTCCGGAAGGGCCGCAGGGACCGAAGGGAGACACTGGAGCCCCCGGGCAAGGAACAGAACTGCTTACTACTGCCAATACATGGACTCAGGCACAAACTTTTAATGGTGGTATTAATGGAAATTTGACGGTAAACGGAAACGGATCATTTAACGATGTTCAGATCCGCTCGGATAAACGCAACAAGCGAAATCTGGTAAAACTGGATAATGCGTTAGATCGTCTGGAGGCACTTACTGGTTATCTTTACGAGATACAGTACTCTGCCGACGGTTGGCAAACGTCGGTTGGTTTAATTGCTCAGGATGCACAAAAAGCCTTGCCTGAACTGGTAACTGAAGACGCAGACGTTATATCTGGTGAAAAACGTCTGCGTCTTAACTACAACGGCATAATTGCATTGTTAGTCGAAGGCTTTAAAACACTTCGTCATGAGATTAAAGAACTCCGGGAGAAGTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0046718 symbiont entry into host cell Biological Process IEA:InterPro (UniProt)
GO:0019062 virion attachment to host cell Biological Process IEA:InterPro (UniProt)

Tertiary structure

PDB ID
207e56b8828b8faf14cdd89450d31c5f43caa7311ecca8076e66d148cf957601
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6222
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50