Protein

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Genbank accession
XLD54340.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MTTYAESGYYSSGELVTYQPPEASGLWMFELHVHRKNASGHVEYGSIVATAMNGNKWGIICNDGSWGGWYRISRSDGSMVLAGGDVPNSLGANSLVIGDSDTGFRQNGDGILQAIADNQVMFAFTKSGNIAYRTIQSLAPEDARFAYVEGVRRGGANCFIGGNVEGGAFTAWRDRAAGMLVELPSDDVAVNVVKVVRWGGDWAFGIDVVRYGAGGCETHFNVKGAVYGFNDAGYASAVQWVNTSDIRLKANLKEIESAKEKVKSIKGYTYFKRNNLDEDEYSFYSEEAGVIAQDVQTVLPEAVYKISDSEYLGVSYGGVTALLVNAINEMIDDSDKQNETIQKQQDEINELKNEVAEMKKMIEEMQSMFIHIAK
Physico‐chemical
properties
protein length:374 AA
molecular weight: 40928,20110 Da
isoelectric point:4,77848
aromaticity:0,10428
hydropathy:-0,27754

Domains

Domains [InterPro]
DC_1202
STR
2–374
DC_1202
IPR036388
RBD
233–372
IPR036388
IPR030392
CHP
244–341
IPR030392
IPR030392
CHP
244–304
IPR030392 Coil
XLD54340.1
1 374
Architecture
STR
STR 2-374
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLD54340.1
1 374
Domain Start End Length (AA) Confidence
N-terminal 1 22 22 0,0087
Central domain 23 221 200 0,5833
C-terminal 222 374 152 0,8794
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-22
Central
23-221
C-terminal
222-374

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SeTS_UALMA_PCST1
[NCBI] 		3372873 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLD54340.1 [NCBI]
Genbank nucleotide accession
PQ374047.1 [NCBI]
CDS location
range 48063 -> 49187
strand +
CDS
ATGACAACTTATGCAGAAAGCGGTTATTACTCTAGCGGAGAGCTTGTTACATATCAACCTCCTGAAGCCTCTGGTTTGTGGATGTTTGAATTACATGTACACAGAAAAAATGCAAGCGGTCACGTTGAATATGGAAGCATTGTTGCAACCGCAATGAACGGTAATAAATGGGGTATCATATGCAATGATGGCTCTTGGGGTGGATGGTACAGGATTTCAAGATCTGATGGTTCAATGGTTCTTGCGGGTGGAGATGTTCCAAACAGTCTTGGCGCAAACTCTTTGGTTATTGGTGATTCTGATACTGGATTTAGGCAAAATGGAGATGGCATTCTTCAAGCTATTGCTGATAATCAAGTGATGTTTGCATTTACAAAAAGTGGCAATATTGCATACAGAACTATTCAATCACTTGCTCCAGAAGATGCTAGATTCGCTTATGTTGAAGGAGTTAGACGCGGTGGCGCTAATTGCTTTATAGGTGGAAATGTTGAGGGTGGTGCTTTTACTGCATGGCGTGATCGCGCCGCTGGTATGCTTGTTGAACTTCCAAGCGATGATGTAGCCGTTAACGTTGTTAAGGTTGTAAGGTGGGGTGGTGATTGGGCTTTTGGTATAGATGTTGTCAGATATGGCGCTGGAGGTTGCGAAACTCATTTTAATGTAAAGGGCGCTGTTTATGGGTTTAACGATGCTGGTTATGCGTCTGCTGTGCAATGGGTTAACACTTCCGATATTCGCCTGAAAGCAAACCTAAAAGAGATTGAAAGCGCTAAAGAAAAAGTGAAATCAATAAAAGGTTACACTTATTTTAAGCGCAACAATCTTGATGAAGATGAATATTCTTTCTATTCGGAGGAGGCTGGTGTAATAGCTCAAGACGTGCAAACTGTTTTACCGGAAGCTGTTTACAAGATTTCAGATTCAGAATATTTAGGTGTTAGCTATGGCGGTGTAACTGCTCTTTTGGTTAACGCAATTAATGAAATGATTGATGATTCAGATAAGCAGAATGAAACCATTCAGAAGCAACAAGATGAAATCAATGAGCTAAAAAATGAAGTAGCAGAAATGAAAAAGATGATCGAGGAAATGCAATCAATGTTTATTCATATTGCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a93c78acdc71b87e2a4af6f2c5ce24803875624e1ee13316106dca46ce6bfda5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7554
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50