Protein

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Genbank accession
XUZ45540.1 [GenBank]
Protein name
tail appendage
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDETNFVLNRDGSRNRRNGMDFEDGATKVVCTTVVPADGTIAITSHNWENAGGEVGRWISVVQVGTELKLFQTTGDTLSEGNFFNYQFVNMQPTQKLSYAVVDGLLVVANGSRDIYIFDYENGSVSVSTKRLLVRDLFGVQDIVDGVDLRQGNDIATRPTVQTSAHIYNLRNQTFGVPRVTWSSDIPSDPIADFKTASSGKFPSNSDSVNLALSKRADVPNSSADRFRPEDIIFNPVGTLEAARGFFIIDALQRGKSRLEEMVKLKQRYPALSFTASSLPQDETPGGASVICEYAGRVWYAGFSGQIIGGDDQSPRMVSYVLFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAYDIIKLVNVGSAVVVVAANGVWMIQGGSDYGFTATNYLVTKISEQGCSSPNSVVVIDNSFMYWGDDGIYHFTRNQYGDYVANNLTEKTIQKYYEKIPSDAVLNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPAKIGSISSNRLPIPVGSVKIPPYKLVETEEEVTVNTEQVTVSGELVTVKVSTRSSVIRETKYIIVDRISSPMRISFGGYTDEEFVDWRSVNGVGVDASAYLITGYLAGGDYQREKFAPYITFHFRKTEDGFIEDGEGDWIPTNQSSCMVQSQWAWTNSPASNKWGRTWQAYRFRRHFFPDSIGNPFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV
Physico‐chemical
properties
protein length:771 AA
molecular weight: 85145,06380 Da
isoelectric point:4,85350
aromaticity:0,11025
hydropathy:-0,25914

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUZ45540.1
1 771
Domain Start End Length (AA) Confidence
N-terminal 1 175 175 0,9736
Central domain 176 374 200 0,4633
C-terminal 375 771 396 0,2067
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-175
Central
176-374
C-terminal
375-771

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaP_DMTU_1
[NCBI] 		3424871 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUZ45540.1 [NCBI]
Genbank nucleotide accession
PV659690 [NCBI]
CDS location
range 3172 -> 5487
strand -
CDS
ATGGCAAAGACGACTAATGCGGCAGAGTTCAACACTTTTGTTGGGGGCTTAATCACTGAGGCTAGCCCCCTCACTTTTCCACAGAATGCATCTATTGATGAGACTAACTTTGTTTTAAATCGTGATGGTTCCAGAAATCGTCGCAATGGTATGGATTTTGAAGATGGTGCTACAAAGGTAGTTTGCACCACTGTCGTGCCGGCAGATGGCACTATAGCCATCACCTCTCATAATTGGGAAAATGCTGGTGGTGAAGTTGGTAGATGGATTAGCGTAGTTCAAGTTGGCACTGAACTTAAACTTTTTCAAACAACTGGTGACACATTGTCGGAGGGCAACTTCTTCAATTACCAGTTTGTCAACATGCAGCCGACTCAAAAGTTGTCGTACGCTGTGGTGGACGGTCTGTTGGTAGTAGCCAATGGCAGTAGAGATATTTACATATTTGACTATGAGAATGGTTCAGTCAGCGTATCTACTAAGAGGTTGCTAGTCAGAGACTTGTTTGGAGTCCAGGACATTGTTGATGGCGTTGATTTGAGGCAAGGTAACGATATTGCCACTAGACCAACCGTTCAAACCAGTGCTCATATTTATAACCTGAGAAACCAAACCTTCGGAGTACCAAGAGTAACTTGGTCTAGTGACATTCCAAGTGACCCCATTGCAGACTTTAAAACTGCATCTTCTGGCAAGTTTCCATCCAACTCAGACTCTGTAAACTTGGCCTTGTCCAAGAGGGCAGATGTGCCTAACAGTAGTGCTGACAGATTTAGGCCAGAAGACATTATCTTCAATCCGGTAGGTACACTGGAGGCTGCTAGGGGATTCTTTATCATCGATGCCCTGCAACGGGGCAAAAGCCGTCTAGAAGAGATGGTTAAGCTGAAGCAGAGGTACCCAGCCCTGTCATTCACTGCATCCAGTCTGCCGCAAGATGAGACCCCTGGTGGTGCTTCTGTAATATGCGAATATGCTGGCCGTGTCTGGTACGCTGGATTCTCAGGCCAAATTATAGGTGGTGATGATCAATCCCCAAGAATGGTTTCCTATGTATTGTTTAGCCAATTAGTAGATAGTCCTGCGGACATTGTTAATTGTTACCAAGATGGTGATCCCACCAGTACTGAGGAACCTGAGCTAGTTGATACGGATGGCGGCTTCATTCGTATTGAGGGTGCGTATGACATTATCAAACTGGTCAATGTAGGAAGTGCTGTAGTAGTTGTAGCGGCTAATGGTGTTTGGATGATCCAAGGTGGCAGTGACTATGGATTTACAGCGACTAACTATCTTGTCACTAAAATTAGTGAGCAGGGCTGCTCTTCGCCCAACTCAGTAGTTGTTATTGATAACAGTTTTATGTATTGGGGTGACGATGGTATTTATCACTTCACCCGCAACCAATACGGAGACTATGTAGCTAACAACCTCACTGAAAAGACCATTCAGAAGTATTACGAAAAAATTCCATCTGATGCCGTCTTAAACGCCACTGGGTTCTACGACAGTTACGATAAAAAAGTTAAGTGGTTGTACAATACTGTCTTGGATGGAAGGACTGAACCAGTAACTGAGTTAGTGTTTGACTTGGCTCTGGGAGCGTTCTACCCAGCTAAGATTGGCAGCATAAGCTCAAATCGTCTTCCCATACCTGTTGGGTCTGTGAAAATTCCACCATATAAGCTTGTGGAAACAGAAGAAGAAGTAACTGTAAACACTGAACAAGTCACTGTATCTGGAGAATTGGTAACTGTCAAGGTGAGTACAAGGTCTTCGGTTATTAGGGAGACTAAGTACATCATTGTAGATAGGATATCCTCCCCGATGCGCATCAGTTTTGGTGGATACACAGATGAAGAGTTTGTCGATTGGCGGTCGGTCAATGGTGTTGGGGTAGATGCTTCAGCCTATCTGATTACAGGGTACTTGGCTGGTGGCGATTATCAAAGGGAGAAATTTGCACCTTACATCACTTTCCACTTCAGGAAGACTGAGGACGGATTTATCGAGGATGGTGAAGGAGACTGGATACCAACTAATCAGTCGTCTTGTATGGTGCAGAGTCAGTGGGCTTGGACCAATTCGCCAGCCTCCAATAAGTGGGGTAGGACTTGGCAAGCCTATAGATTCAGAAGACACTTCTTCCCAGACTCTATTGGCAATCCGTTTGATGATGGCAACTCTGTCGTGGAAACTAAGAGTAGACTGAGGGGCAGTGGTAAAGTTCTTTCTTTGTATATCACTACTGAACCCAAGAAAAATTTGCACATCTATGGTTGGTCTATGTTGGTGGATGTAAATGGAACAGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
04a8f762946c113586e9805b13cc878bf43de109f451011368d8034f30252eec
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9048
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, Genomic Characterization, and Analysis of Phage vB_PaP_DMTU_1: A Novel Lytic Phage Targeting Pseudomonas aeruginosa Bora,D., Singh,A.K., Jha,A.N. and Mandal,M. 2023-07-11 — GenBank