Protein

Genbank accession
AZV01282.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MQNTYKHISDSSSFVTFNPANTQWDQSIKDVQTALSKIGSWAMIGKGLPISTETLNGIIRTATRDEVLKGLGSGAVTPKYLEERLAHPQATESVLGLTKYANNSETLAGSINNKAVVPTGLKHTLDSRTSTEGRTGLIKISSLAAAAQGIDDTTAMTPKKVKHAINQLSPSYGVATEKNSGTVNIASIGQVAQGQAHDGIAVSPKGFISTRATETQVGTTKIANVAQTKAMTDGTVVISPKNLAQLKASDSEFGLVKTTTTIGNSGANLALSPMAPVVPNTRTVNNKPLTGNIVLSADDVGAYSKSQVWTKTESDARYMPKTDIPKQSFYTYFDAWDLGGKYPIGRGGYWADIGQTRLPFGEYTRLQFNLTLKNTSDLRPFVLRIWQNGTLIKEHSRFIGYPNNYDFTDRLLINGKFKAGDIIRAEATANGGPNYRYNLSTWYLLFT
Physico‐chemical
properties
protein length:447 AA
molecular weight: 48344,95640 Da
isoelectric point:9,49486
aromaticity:0,08054
hydropathy:-0,33915

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage vB_SdyM_006
[NCBI] 		2500762 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZV01282.1 [NCBI]
Genbank nucleotide accession
MK295204 [NCBI]
CDS location
range 87611 -> 88954
strand +
CDS
ATGCAAAATACATATAAACATATAAGTGACAGTTCGTCTTTTGTCACTTTTAATCCAGCCAATACACAGTGGGACCAATCTATTAAAGATGTCCAGACTGCTTTATCAAAAATTGGTTCATGGGCTATGATAGGTAAAGGATTACCTATCTCAACAGAAACATTAAACGGGATAATTAGAACTGCAACTCGTGATGAAGTTCTAAAAGGTTTAGGTTCAGGAGCGGTGACACCTAAATATTTAGAAGAACGTCTAGCTCATCCTCAAGCAACAGAATCCGTTTTAGGATTAACTAAATATGCTAATAATTCTGAAACACTAGCTGGGTCCATTAATAATAAGGCTGTTGTTCCTACTGGATTAAAACATACATTAGATTCTAGAACTTCTACTGAAGGAAGAACTGGGTTAATTAAGATATCTTCTTTAGCCGCAGCGGCACAAGGTATTGATGACACAACGGCTATGACTCCTAAAAAAGTCAAACATGCTATAAACCAATTATCCCCGTCTTATGGTGTTGCAACAGAAAAAAATAGTGGGACCGTTAATATTGCGTCTATAGGGCAAGTTGCCCAAGGTCAAGCACATGACGGTATTGCAGTTTCTCCTAAAGGTTTTATTTCAACTAGGGCCACAGAAACACAAGTTGGTACAACTAAAATAGCTAATGTTGCTCAAACTAAAGCCATGACTGATGGGACTGTTGTTATTTCCCCTAAAAATTTGGCTCAACTTAAAGCATCAGATTCTGAATTTGGATTAGTTAAAACCACAACAACTATAGGCAATTCTGGTGCCAATCTTGCACTAAGTCCTATGGCTCCAGTTGTCCCTAATACAAGAACCGTAAACAATAAGCCTTTAACAGGCAATATTGTTTTAAGCGCTGATGACGTAGGTGCATACTCTAAATCACAAGTATGGACTAAAACAGAATCCGATGCAAGGTATATGCCTAAAACAGATATTCCAAAACAGTCATTTTATACTTATTTTGATGCATGGGATTTAGGTGGTAAATATCCGATTGGGCGTGGCGGTTATTGGGCAGATATAGGCCAAACTAGATTACCATTTGGTGAATATACACGACTACAATTTAATCTGACATTAAAAAATACATCAGATCTTAGACCGTTTGTGTTAAGAATATGGCAAAATGGAACATTAATAAAAGAACATTCTAGATTTATAGGTTACCCAAACAATTATGATTTTACAGATAGATTATTAATTAATGGCAAATTTAAAGCTGGGGATATTATTAGGGCAGAAGCCACAGCCAATGGTGGTCCTAATTACAGATATAATTTAAGTACATGGTACCTATTATTCACATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
23c4dbdff12091d48b6255c842752a797c00490b2d4e17efde0f5a742a14c098
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7327
Evidence 0,7327
Download PDB

Literature

Title Authors Date PMID Source
Characterization of novel bacteriophages infecting Shigella spp. and E. coli O157: H7 Shahin,K., Bao,H. and Wang,R. 2020-06-17 — GenBank