Protein

Genbank accession
QCS36038.1 [GenBank]
Protein name
major capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKGFSKLSLAPAVRKHSKMDLSSVSLLTQNIGEILPLHTLECIPGDKIPVKVQLFSRMMPLVVPSYVKASYNVMSAFVPYHQLVQSADAWLTGDRYYAGRAPKIAFYTMGDMFTTFSYCMTTGTAEEFDVSYINSAGTTVYLRYGHGSVDQYRTMKTLMSLGYRCPIGVDLRTGSNWNTVAKNIKVSAMPLLALAKVYYDHMSQSTLYQVNVLGKILNGIYSEDTNYIKQDGSLVCSFGASYDCSPRFVVNQIVQKQPSDYFTTAWQASEAPIAGTEYASNIGSMSNQIGSLNTIFEEGPSNDGVATSLAAGKYSTTLSQVALNGLDAFYRFVKRNNYTGGRAVERILARFGIKPSSLVHNVSDVVMPCQKFPIQIGDVTSTSANEADNLFLGSYAGKGIISDGNGFEYSCSDFGILITLGWISIVPMNYLGWNTHLLKNTPLQHYNPEFDGVGTQPISVSEFTNTPGSNETVSSVFGWTDRYNEYRFANDTVIGDYIAFEDMKAWFCGRDRNSAKAQQSGVVNVPIVENPYNRIFVDTNSDVDHFYISSIFDIKATRPMTGLNNSMGDLAEGDISVQRNGEQIS
Physico‐chemical
properties
protein length:586 AA
molecular weight: 64535,13210 Da
isoelectric point:5,77253
aromaticity:0,11263
hydropathy:-0,14130

Domains

Domains [InterPro]
IPR037002
13–569
IPR037002
IPR003514
16–84
IPR003514 IPR003514
IPR016184
17–104
IPR016184
QCS36038.1
1 586
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Capybara microvirus Cap1_SP_99
[NCBI] 		2584802 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCS36038.1 [NCBI]
Genbank nucleotide accession
MK496704 [NCBI]
CDS location
range 1 -> 1761
strand +
CDS
ATGGCTAAAGGTTTTAGTAAGTTGAGTTTGGCTCCCGCCGTGCGTAAGCATTCGAAGATGGACTTGAGTTCTGTTAGTTTGCTTACTCAGAATATTGGTGAGATTTTGCCGTTGCATACTTTGGAGTGTATTCCTGGTGACAAGATACCCGTTAAGGTTCAGTTGTTCTCTCGTATGATGCCTCTTGTAGTTCCGTCTTATGTTAAGGCTTCTTATAATGTGATGTCTGCTTTCGTTCCTTACCATCAGTTGGTACAGTCTGCTGATGCTTGGTTGACTGGTGACCGTTATTATGCTGGTCGTGCTCCTAAGATTGCGTTTTATACAATGGGTGATATGTTTACTACTTTCAGTTACTGTATGACTACTGGTACTGCTGAAGAGTTTGATGTTTCCTACATTAATAGTGCTGGTACTACTGTTTATCTCCGCTATGGTCATGGTAGCGTTGACCAATATCGTACTATGAAGACTTTGATGTCCCTTGGTTATCGTTGTCCTATTGGTGTTGATCTCCGTACTGGTTCTAATTGGAACACTGTTGCTAAGAATATTAAGGTATCTGCTATGCCATTGCTTGCTCTCGCTAAGGTATATTATGACCACATGTCTCAGAGTACACTTTATCAAGTGAATGTATTAGGAAAGATTTTGAATGGTATTTATAGCGAAGACACTAATTACATTAAACAAGATGGTTCATTGGTTTGTTCTTTCGGTGCTAGTTATGATTGTTCTCCTCGCTTTGTAGTTAATCAAATTGTACAAAAACAGCCGTCTGATTATTTTACGACTGCTTGGCAAGCTTCTGAAGCTCCTATTGCTGGTACTGAATATGCTTCTAATATTGGTTCTATGAGTAACCAAATTGGTTCTTTAAATACAATATTTGAAGAAGGTCCGTCTAATGATGGTGTTGCCACTTCTTTGGCTGCTGGAAAATACAGTACTACTCTTAGTCAGGTTGCTCTTAATGGTTTGGATGCTTTCTATCGTTTTGTGAAGCGTAATAATTATACTGGTGGTCGTGCCGTTGAGCGAATTTTGGCTCGCTTTGGTATTAAGCCTTCGTCTTTGGTACATAATGTTAGTGATGTAGTTATGCCATGTCAGAAGTTCCCAATTCAGATTGGTGACGTTACTTCTACATCTGCTAATGAAGCTGATAATTTGTTCCTTGGTAGTTATGCAGGTAAAGGTATTATCTCTGACGGTAATGGATTTGAATATTCTTGCTCTGACTTTGGTATTTTGATTACTTTAGGTTGGATTTCTATCGTGCCTATGAATTATCTTGGTTGGAATACTCATCTTTTGAAGAATACCCCGTTGCAGCACTATAACCCAGAGTTCGATGGTGTTGGTACACAGCCTATCAGTGTTTCTGAGTTTACTAATACTCCTGGTTCTAACGAGACAGTTTCTTCTGTGTTTGGTTGGACTGACCGCTATAATGAGTATCGCTTTGCTAATGATACTGTGATTGGTGATTACATTGCCTTTGAAGATATGAAGGCTTGGTTCTGTGGTCGTGATAGGAATAGTGCTAAGGCTCAACAGTCTGGTGTAGTTAATGTTCCTATTGTTGAGAACCCTTATAATCGTATTTTCGTTGACACTAATAGTGACGTTGACCACTTCTACATTTCGTCCATTTTTGACATTAAGGCTACTCGTCCTATGACTGGTTTGAACAATTCAATGGGTGACCTTGCAGAAGGTGATATCAGTGTACAGAGAAACGGTGAACAGATAAGTTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
213bb99e6b4d9218f002228921db1d0e0a43b47c42cb2ec6a7c25a91816ed074
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5695
Evidence 0,5695
Download PDB

Literature

Title Authors Date PMID Source
Diverse ssDNA viruses associated with Capybara (Hydrochoerus hydrochaeris) in Brazil Fontenele,R.S., Lamas,N.S., Lacorte,C., Varsani,A. and Ribeiro,S.G. 2019-08-02 — GenBank