Protein

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Genbank accession
BDR25881.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MNYRVKHYRYRLIDGGYLVRDLKKNTETSLVFTGTYVKSYVQDVGENLINILNNFSYHLPPVSAVTGQLWWKENTRQMYIFPGPNGLDSTNINNWVPITKFEEDAVWAHITNYNNPHLVDKYSVKLDKLENYPIFDKSKNFADVLNASSARTNLGVFGKDVTYTKAEADALFLKKTDKAANSNNLNGIPAAKFMKVAAPVANAAINVTPSDGLMSFRSGKSYLESRGISNGLSINNTIATNNSSATILELNNTTLSTSSVFIKLYNRGSLNTAPVLALQYRLSPNQLYIGNNQVFHLGYRPTPAQIGALPVNGKASDSAALDGRINSTLATPGTVVERDSSGAITGRLLRSTGNNTSDQFTRNSKIGFVRSNSNNTMRFTPAQALNEWAGYNTLIKKSKGWISWSGPTGSRLDSWNLTVSKLASGRYRVYLSVPAPDTNYVVVLGNADAMVWNNQLNITEQWVTTKTTTYFDVNCKITKADHIINYNPSGWTNRFGEDYFDAPFFSLVIYY
Physico‐chemical
properties
protein length:511 AA
molecular weight: 56761,11760 Da
isoelectric point:9,45501
aromaticity:0,11155
hydropathy:-0,34971

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. 30-2
[NCBI] 		2972142 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR25881.1 [NCBI]
Genbank nucleotide accession
LC727697.1 [NCBI]
CDS location
range 216663 -> 218198
strand +
CDS
ATGAATTACAGAGTAAAACATTATCGATATAGATTAATCGACGGCGGTTATTTAGTCAGAGATTTAAAAAAAAATACAGAAACTTCATTAGTATTTACAGGAACTTATGTAAAATCATATGTACAAGATGTTGGTGAGAATTTAATTAATATATTAAATAATTTCTCATATCATCTTCCACCGGTATCTGCCGTAACAGGGCAGTTATGGTGGAAAGAAAATACAAGGCAAATGTACATATTCCCTGGACCAAATGGATTAGATAGTACAAATATAAATAACTGGGTTCCTATTACTAAATTCGAAGAAGATGCAGTATGGGCTCATATTACTAACTATAATAACCCTCACTTAGTAGACAAATATTCAGTAAAACTAGATAAATTAGAAAATTACCCTATATTCGATAAATCTAAAAATTTTGCAGACGTATTAAACGCAAGTTCTGCTAGAACAAATTTAGGTGTTTTCGGTAAGGATGTTACTTACACTAAAGCAGAAGCAGATGCTTTATTTCTAAAGAAAACAGATAAAGCAGCAAACTCGAATAATTTAAACGGAATACCTGCTGCAAAATTTATGAAGGTTGCTGCTCCTGTGGCAAATGCAGCCATCAATGTAACACCTTCTGACGGATTAATGTCGTTTAGATCAGGAAAATCATACTTAGAATCCAGGGGTATTTCTAACGGTCTATCTATTAATAATACAATAGCTACTAACAATTCATCAGCTACTATATTAGAATTAAATAATACTACTCTTAGTACATCATCTGTTTTTATTAAACTGTATAATAGAGGCTCACTTAATACAGCTCCTGTTCTAGCATTACAATATAGATTATCTCCAAATCAACTATACATCGGAAATAATCAAGTATTTCATTTGGGATATAGACCGACGCCTGCACAAATAGGGGCTCTTCCTGTTAACGGTAAAGCATCAGATTCTGCTGCATTAGACGGTAGAATAAACTCTACACTTGCTACTCCGGGCACTGTAGTAGAGCGAGATTCCTCAGGTGCCATCACTGGTAGATTGTTAAGATCTACGGGCAACAATACTAGTGATCAATTTACTAGAAATAGCAAAATAGGTTTTGTAAGAAGTAATTCAAACAATACTATGAGATTTACTCCGGCGCAAGCATTAAATGAATGGGCCGGATATAACACATTAATAAAAAAATCAAAAGGATGGATATCTTGGTCCGGTCCTACTGGCAGTAGACTAGATTCCTGGAATTTAACAGTTAGTAAATTAGCATCGGGTCGATATAGAGTATATCTATCTGTGCCTGCGCCAGATACAAATTATGTAGTTGTATTAGGAAACGCTGATGCAATGGTATGGAATAATCAACTAAATATAACTGAACAATGGGTAACAACAAAAACTACCACATATTTTGATGTTAACTGTAAAATAACAAAAGCAGATCACATAATAAATTACAATCCATCGGGTTGGACTAACAGATTCGGCGAAGATTATTTCGATGCACCGTTCTTCTCACTTGTAATATACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c637907c5b4afbd6fc8d41c3cde308eb3768a5dadc9f5e55f33616a78c160f69
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6220
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage 30-2 Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank