Protein

View in Explore
Genbank accession
XDJ02693.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MKLKLSNVFRDFKKDVESNFKEIDKLLTELLDIKSKTSNKYLDSLIDTLFTKRYDQLQKEIRAIVLPEMSPLAITEDYEKSLIDLKGERHTSLKSRLDADLNQIKSQSQKTANDDRFIVTENGTIFADFVKKSKTIKSVKKIGIIGDSVAKGSRASKNFGKYLSEKLVATVQNEAVSGATMSTVKANSIYEQAAKIRGMDLVIIQGTDDDWLYKGSAGVQIGTSKTNEKTFYGAFCKTVELIKSNNPKAKILVMTATRQLPVNGTTIRRKDTDKNSLGLDLEAYVNAQVLACSELNVPVFDAYHTDLLDPYNPAFRVKNMVDGLHPNELGHEVITHELLKNYYYFYG
Physico‐chemical
properties
protein length:347 AA
molecular weight: 39006,17000 Da
isoelectric point:8,92309
aromaticity:0,08069
hydropathy:-0,40115

Domains

Domains [InterPro]
DC_0665
ATT
1–105
DC_0665 IPR051532
SSF52266
STR
135–340
SSF52266
IPR036514
STR
135–346
IPR036514
IPR036514
STR
137–346
IPR036514
cd00229
ENZ
142–340
cd00229
IPR013830
ENZ
145–332
IPR013830
XDJ02693.1
1 347
Architecture
ATT
STR
ATT 1-105 | STR 135-346 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Pel11
[NCBI] 		3235046 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus hyicus
[NCBI] 		1284 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ02693.1 [NCBI]
Genbank nucleotide accession
PP971698.1 [NCBI]
CDS location
range 34403 -> 35446
strand +
CDS
ATGAAGTTAAAGTTATCAAACGTGTTTCGTGATTTCAAAAAAGATGTCGAAAGTAATTTTAAAGAAATTGATAAGTTACTGACTGAGTTACTCGACATCAAAAGTAAAACAAGTAATAAGTATTTAGACAGTTTAATTGATACGCTTTTTACTAAACGATATGATCAACTGCAAAAAGAAATCAGAGCGATTGTTTTACCTGAAATGTCACCTCTTGCTATTACAGAGGATTATGAAAAGAGTTTAATTGATTTAAAAGGGGAGCGACATACATCACTCAAATCACGATTAGATGCAGATTTAAATCAAATTAAAAGTCAATCTCAAAAGACTGCTAATGATGATAGATTTATCGTGACTGAAAACGGTACAATCTTTGCTGATTTTGTTAAAAAGTCAAAGACAATCAAAAGTGTTAAAAAAATTGGGATTATCGGCGATTCTGTTGCAAAAGGTAGTAGAGCTAGTAAAAATTTTGGTAAATACCTGTCTGAAAAATTAGTTGCTACTGTACAGAACGAAGCGGTAAGCGGTGCTACGATGTCAACTGTTAAAGCAAATTCGATTTATGAACAAGCTGCAAAAATTAGAGGAATGGATTTAGTTATCATTCAAGGGACTGATGACGACTGGTTGTATAAAGGCTCGGCAGGTGTTCAAATCGGAACAAGTAAAACAAATGAAAAGACGTTTTACGGTGCGTTTTGTAAAACAGTTGAATTGATTAAATCTAACAATCCTAAAGCTAAGATTCTTGTGATGACTGCAACTCGTCAATTGCCGGTTAATGGCACGACAATTAGACGTAAAGACACCGATAAGAATAGTCTGGGGCTTGATTTAGAAGCGTATGTAAATGCGCAAGTGCTTGCGTGTTCAGAACTTAATGTACCGGTTTTTGATGCATACCACACAGACTTATTAGATCCATATAATCCTGCTTTCAGAGTTAAAAACATGGTTGATGGATTGCATCCGAACGAGCTCGGACACGAAGTAATTACACATGAACTGTTAAAAAATTACTACTATTTTTACGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
82c2ac501c8f1a44722aae41518e13d9e173777d69cb5540282b2d6025971935
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New lytic and new temperate phages specific for Staphylococcus hyicus Petrzik,K. and Sovova,L. 2025-03-14 — GenBank